HHsearch alignment for GI: 254780709 and conserved domain: pfam01656

>pfam01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.
Probab=98.67  E-value=9.8e-07  Score=67.57  Aligned_cols=157  Identities=19%  Similarity=0.223  Sum_probs=84.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH----------------------HHHH-------HC
Q ss_conf             135444442478999999985226742677434512456889999----------------------9753-------03
Q gi|254780709|r  116 VVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKI----------------------WADR-------TS  166 (321)
Q Consensus       116 ~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~----------------------~a~~-------~~  166 (321)
T Consensus         4 ~s~KGGVGKTT~a~nLA~~la~~G~rVlliD~D~q~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (212)
T pfam01656         4 AGTKGGVGKTTLAANLARALAKRGYRVLLIDLDPQANLTS-SLGKGPDLIDVLKEGLEIVDAQPLQHIAAAIVPSRNLDP   82 (212)
T ss_pred             ECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHCCCCCCCCCCCCCCHHCCCCCHHHHHHEEECCCCCCC
T ss_conf             7689980699999999999997899789983899996258-865876434444441010112100245642224555587


Q ss_pred             CCCCCCCC---CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-
Q ss_conf             53212235---86612454228999965148759986543332115778999989987630222343011231023352-
Q gi|254780709|r  167 ADFVCSEI---GSDAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTG-  242 (321)
Q Consensus       167 v~~~~~~~---~~dp~~v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVlda~~g-  242 (321)
T Consensus        83 l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~D~viiD~pp~~~~--~~~~al-------~-----~ad~vivv~~p~~~s  148 (212)
T pfam01656        83 LLLIPSNLSLANFESELILEGGEEGLIKLAYDYVIIDGAPGLGE--LTANAL-------V-----AADILVVPIEPEGVA  148 (212)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCH--HHHHHH-------H-----CCCEEEEEECCCHHH
T ss_conf             46533501566777777999999876660499899947997559--999999-------8-----399899994897699


Q ss_pred             -HHHHHHHHHHHHH-CCCCEEEEECCCCCCCHH---HHHHHHHHHCCCEE
Q ss_conf             -2577899987643-589769996545787069---99999999769889
Q gi|254780709|r  243 -QNALRQVEMFHAV-AGTTGLIMTKMDGTARGG---GLIPIVVTHKIPVY  287 (321)
Q Consensus       243 -q~~~~~a~~F~~~-~~~~g~I~TKlD~ta~~G---~~ls~~~~~~~Pi~  287 (321)
T Consensus       149 l~~~~~l~~~~~~l~~~~~gvV~N~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (212)
T pfam01656       149 VLGAQRLLELVERLGLKILGVVLNKVDRGDERHLDKEIEALERKTGIPVL  198 (212)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
T ss_conf             99999999999985996229999148899836630789999999789975