HHsearch alignment for GI: 254780709 and conserved domain: pfam03266

Probab=97.43  E-value=0.00036  Score=49.59  Aligned_cols=116  Identities=25%  Similarity=0.309  Sum_probs=63.7

Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHCCCCE-EEEEC----CCCCHH------HHHHHHHHHHHHCCC-C-CCCCCCCCCHH
Q ss_conf             31135444442478999999985226742-67743----451245------688999997530353-2-12235866124
Q gi|254780709|r  114 ILVVGVNGVGKTTVIGKLSKKMSDAGLKV-MLAAG----DTFRSA------AIDQLKIWADRTSAD-F-VCSEIGSDAAA  180 (321)
Q Consensus       114 il~vG~nG~GKTTT~aKLA~~~~~~g~kV-~lva~----DtfR~a------A~eQL~~~a~~~~v~-~-~~~~~~~dp~~  180 (321)
T Consensus         2 i~ITG~pGvGKTTli~kv~~~l~~~~~~v~GF~T~evre~g~R~GF~iv~l~~g~-~~~la~~~~~~~~~vGky~v~~~~   80 (168)
T pfam03266         2 IFITGPPGVGKTTLVKKVIELLKSEGVKVGGFYTPEVREGGRRIGFDIVDLASGE-RGPLARVGGVSGPRVGKYVVNLEE   80 (168)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEECCCCEEEEEEEECCCCC-EEEEEEECCCCCCCCCCCEECHHH
T ss_conf             8997899988999999999999867970748993021258937899999904782-677444068877545771666899


Q ss_pred             ---HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             ---5422899996514875998654333211577899998998763022234301123102
Q gi|254780709|r  181 ---LAYEAFKQAQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLD  238 (321)
Q Consensus       181 ---v~~~a~~~a~~~~~DvvliDTAGR~~~~~~lm~EL~ki~~v~~~~~~~~p~~~~lVld  238 (321)
T Consensus        81 fe~~~~~~L~~a-~~~~dlivIDEIG~mEl~s~~F~~--~v~~~l~---~--~~~vl~ti~  133 (168)
T pfam03266        81 FEEIALPALRRA-LEEADLIIIDEIGPMELKSPKFRE--AIEEVLS---S--NKPVLAVVH  133 (168)
T ss_pred             HHHHHHHHHHHC-CCCCCEEEEECCCHHHHHHHHHHH--HHHHHHC---C--CCCEEEEEE
T ss_conf             999999999840-668989999763145331499999--9999966---9--997999997