HHsearch alignment for GI: 254780709 and conserved domain: pfam08433
>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.
Probab=97.46 E-value=0.00022 Score=51.11 Aligned_cols=74 Identities=20% Similarity=0.290 Sum_probs=50.8
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3113544444247899999998522674267743451245688999997530353212-235866124542289999651
Q gi|254780709|r 114 ILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVC-SEIGSDAAALAYEAFKQAQAK 192 (321)
Q Consensus 114 il~vG~nG~GKTTT~aKLA~~~~~~g~kV~lva~DtfR~aA~eQL~~~a~~~~v~~~~-~~~~~dp~~v~~~a~~~a~~~ 192 (321)
T Consensus 2 ivl~G~P~SGKSt~A~~L~~~l~~~~~~v~vi~d~~~~~~~~-------------~y~~s~~Ek~~R~~l~s~v~r~Ls~ 68 (266)
T pfam08433 2 IILTGLPSSGKSTRAKELAKYLEEKGYDVIVISDESLGIESD-------------DYKDSKKEKFLRGSLRSAVKRDLSK 68 (266)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 798579999688999999999997599389978001267531-------------0001047899999999999875166
Q ss_pred CCCEEEEEC
Q ss_conf 487599865
Q gi|254780709|r 193 KVDVLIIDT 201 (321)
Q Consensus 193 ~~DvvliDT 201 (321)
T Consensus 69 ~-~iVIlD~ 76 (266)
T pfam08433 69 N-TIVIVDS 76 (266)
T ss_pred C-CEEEECC
T ss_conf 8-8899548