RPSBLAST alignment for GI: 254780709 and conserved domain: TIGR01425

>gnl|CDD|130492 TIGR01425, SRP54_euk, signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model. Length = 429
 Score =  134 bits (339), Expect = 2e-32
 Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 24/279 (8%)

Query: 48  ELEDLLIRSDIGVAVAQKIVE--------ELLTKRYAKDVSVQRVLYDVSELIHKMLMPL 99
           E+   L+ SD+ + + +++ E        E +     K   +Q  ++   EL   ++ P 
Sbjct: 33  EICTALLESDVNIKLVRQLRENIKKAINLEEMASGLNKRKMIQHAVFK--ELC-NLVDPG 89

Query: 100 SKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKKMSDAGLKVMLAAGDTFRSAAIDQLK 159
            + F      + +VI+ VG+ G GKTT   KL+      G K  L   DTFR+ A DQLK
Sbjct: 90  VEAFTPK-KGKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCADTFRAGAFDQLK 148

Query: 160 IWADRTSADFVCSEIGSDAAALAYEAFKQAQAKKVDVLIIDTAGRLHNNSIL---MAGIG 216
             A +    F  S   SD   +A E  ++ + +  D++I+DT+GR      L   M  + 
Sbjct: 149 QNATKARIPFYGSYTESDPVKIASEGVEKFKKENFDIIIVDTSGRHKQEDSLFEEMLQVA 208

Query: 217 KMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHAVAGTTGLIMTKMDGTARGGGLI 276
           + I+         P +++ V+D + GQ A  Q + F        +I+TK+DG A+GGG +
Sbjct: 209 EAIQ---------PDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIITKLDGHAKGGGAL 259

Query: 277 PIVVTHKIPVYFLGVGEGINDLEPFVAKDFSAVITGCLD 315
             V   K P+ F+G GE I+D E F  + F + + G  D
Sbjct: 260 SAVAATKSPIIFIGTGEHIDDFEIFKTQPFISKLLGMGD 298