RPSBLAST alignment for GI: 254780709 and conserved domain: PRK00771

>gnl|CDD|179118 PRK00771, PRK00771, signal recognition particle protein Srp54; Provisional. Length = 437
 Score =  182 bits (464), Expect = 1e-46
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 25/298 (8%)

Query: 27  KLKEGITDIISSRRLD-DGVREELEDL---LIRSDIGVAVA----QKIVEELLTKRYAKD 78
            L++ +  +    R+D   V+E ++D+   L+++D+ V +     + I E  L +   K 
Sbjct: 4   SLRDALKKLAGKSRIDEKTVKEVVKDIQRALLQADVNVKLVKELSKSIKERALEEEPPKG 63

Query: 79  VSVQ----RVLYDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVIGKLSKK 134
           ++ +    +++Y+  EL+   L+            +P  I++VG+ G GKTT   KL++ 
Sbjct: 64  LTPREHVIKIVYE--ELVK--LLGEETEPL-VLPLKPQTIMLVGLQGSGKTTTAAKLARY 118

Query: 135 MSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQAQAKKV 194
               GLKV L A DT+R AA DQLK  A++    F       DA  +A E  ++   KK 
Sbjct: 119 FKKKGLKVGLVAADTYRPAAYDQLKQLAEKIGVPFYGDPDNKDAVEIAKEGLEKF--KKA 176

Query: 195 DVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQVEMFHA 254
           DV+I+DTAGR      L+  + ++   +K      P  VL V+DAT GQ A  Q + FH 
Sbjct: 177 DVIIVDTAGRHALEEDLIEEMKEIKEAVK------PDEVLLVIDATIGQQAKNQAKAFHE 230

Query: 255 VAGTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEPFVAKDFSAVITG 312
             G  G+I+TK+DGTA+GGG +  V     P+ F+G GE I+DLE F    F + + G
Sbjct: 231 AVGIGGIIITKLDGTAKGGGALSAVAETGAPIKFIGTGEKIDDLERFDPDRFISRLLG 288