RPSBLAST alignment for GI: 254780709 and conserved domain: COG0541
>gnl|CDD|30887 COG0541, Ffh, Signal recognition particle GTPase [Intracellular trafficking and secretion]. Length = 451
Score = 206 bits (526), Expect = 7e-54
Identities = 102/304 (33%), Positives = 162/304 (53%), Gaps = 22/304 (7%)
Query: 21 FASTSLKLKEGITDIISSRRLD-DGVREELEDL---LIRSDIGVAVAQKIVEELLTKRYA 76
F S S +L + + R+ V+E L ++ L+ +D+ + V + ++ + +
Sbjct: 2 FESLSDRLSNALKKLRGKGRITEKDVKEALREIRRALLEADVNLKVVKDFIKRIKERALG 61
Query: 77 KDVS--------VQRVLYDVSELIHKMLMPLSKPFNWDFSHRPHVILVVGVNGVGKTTVI 128
++V +++Y+ EL+ K+L + N P VIL+VG+ G GKTT
Sbjct: 62 EEVPKGLTPGQQFIKIVYE--ELV-KLLGGENSELNLA-KKPPTVILMVGLQGSGKTTTA 117
Query: 129 GKLSKKMSDAGLKVMLAAGDTFRSAAIDQLKIWADRTSADFVCSEIGSDAAALAYEAFKQ 188
GKL+K + G KV+L A DT+R AAI+QLK A++ F S D +A A ++
Sbjct: 118 GKLAKYLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEK 177
Query: 189 AQAKKVDVLIIDTAGRLHNNSILMAGIGKMIRVLKRLDPHAPHSVLQVLDATTGQNALRQ 248
A+ + DV+I+DTAGRLH + LM + ++ V+ P L V+DA GQ+A+
Sbjct: 178 AKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVIN------PDETLLVVDAMIGQDAVNT 231
Query: 249 VEMFHAVAGTTGLIMTKMDGTARGGGLIPIVVTHKIPVYFLGVGEGINDLEPFVAKDFSA 308
+ F+ G TG+I+TK+DG ARGG + P+ F+G GE I+DLEPF F++
Sbjct: 232 AKAFNEALGITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFAS 291
Query: 309 VITG 312
I G
Sbjct: 292 RILG 295