HHsearch alignment for GI: 254780710 and conserved domain: pfam02567
>pfam02567 PhzC-PhzF Phenazine biosynthesis-like protein. PhzC/PhzF is involved in dimerization of two 2,3-dihydro-3-oxo-anthranilic acid molecules to create PCA by P. fluorescens. This family also contains a putative thymidilate synthase from Mycobacterium tuberculosis, though there is no significant sequence similarity to pfam00303 members. This family appears to be distantly related to pfam01678, including containing a weak internal duplication. However members of this family do not contain the conserved cysteines that are hypothesized to be active site residues (Bateman A pers obs).
Probab=99.59 E-value=4.1e-12 Score=99.72 Aligned_cols=255 Identities=21% Similarity=0.185 Sum_probs=164.8
Q ss_pred EEEECCCCCCEEEE-ECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 37851767738999-47788878888899872035671435589982588888668999971787621233203322311
Q gi|254780710|r 8 FAKMEGIGNKILVI-DMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCVVR 86 (296)
Q Consensus 8 F~Kmhg~GNDFiii-D~~~~~~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~a~ 86 (296)
T Consensus 4 Ft~~~f~GNPaaVv~~----~~~Ls~~~mQ~IA~e~n~--SETaFv~~~~~~~~~~~lR~FTP~-~Ev~fcGHaTlaaa~ 76 (280)
T pfam02567 4 FTDSPFKGNPAAVVLD----ADELTDEEMQAIAAEFNL--SETAFVLPPSDEDADFRLRIFTPV-AEVPFCGHATLATAH 76 (280)
T ss_pred CCCCCCCCCEEEEEEC----CCCCCHHHHHHHHHHHCC--CEEEEEECCCCCCCCEEEEEECCC-CCCCCCCCHHHHHHH
T ss_conf 7599998631799988----989999999999998799--658997058888773699996785-413556660589999
Q ss_pred HHHCC--CCCCEEEEEECCCCEEEEECCC---CEEEECCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEE
Q ss_conf 10013--5764037983588379998577---427740368777777685656565434430110577774021309995
Q gi|254780710|r 87 FLTSR--MKRKSFTFETIRGILVAKENRD---GSISVDMGEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVS 161 (296)
Q Consensus 87 yl~~~--~~~~~~~i~T~~g~~~~~~~~~---~~v~V~mG~p~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 161 (296)
T Consensus 77 ~L~~~~~~~~~~~~~~t~~G~l~v~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~ 151 (280)
T pfam02567 77 ALFEEGGNGNKTLELETLAGIVPVKLVEGDGGAEGAIEMNFPEFDLPAVSREDDALL-----LAGIGLEFHEALPIAVKS 151 (280)
T ss_pred HHHHHCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCEEEEE
T ss_conf 999837999987999937288999998158854899993799888767883555665-----416674202566628995
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEE-E--EEECCCCEEEEEECCCCCC--CCCCCHHHHHHHHHHH
Q ss_conf 587427974255768688876310002332375555146-7--9972887289998046787--6656323589999999
Q gi|254780710|r 162 MGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLS-I--ARVTSLESLDLRTWERGVG--LTAACGSAACASVVAS 236 (296)
Q Consensus 162 iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~-f--v~v~~~~~I~iRt~ERGvG--eTlACGTGA~Asa~~~ 236 (296)
T Consensus 152 ~G~~~l~v~l~-~~~--~l~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~FaP~~Gi~EDpaTGSA~~aLa~yl 228 (280)
T pfam02567 152 TGLWHVFVPLK-SLE--ALAALDPDLDAAIADCPDDGVIVGPAASAGSPRDYHARMFAPALGIVEDPATGSAAGALGAYL 228 (280)
T ss_pred CCCCEEEEEEC-CHH--HHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 69977999969-999--998589997999845888679999961689875699981645679777676256579999999
Q ss_pred HHHCCCCC--CEEEEC-----CCCEEEEEEECCC----EEEEEECEEEEEEE
Q ss_conf 98178898--079990-----7957999995898----19999462899988
Q gi|254780710|r 237 GCLHKTNR--AVSVKM-----LGGGLLIEWHDNN----HVFMTGEAKKEWEG 277 (296)
Q Consensus 237 ~~~~~~~~--~v~V~~-----pGG~L~v~~~~~~----~i~l~Gpa~~vf~G 277 (296)
T Consensus 229 ~~~~~~~~~~~~~i~QG~~~gR~g~i~v~~~~~~~~~~~V~vgG~av~v~~G 280 (280)
T pfam02567 229 SRHGNKPQFGNIAIRQGQASGRPGTLEVEVEGRGGRDVRVRVTGRAVTVMEG 280 (280)
T ss_pred HHHCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEEEEC
T ss_conf 9846998774599988736089989999998279964589998189999879