HHsearch alignment of GI: 254780710 and MMDB domain: 2gke_A_

>2gke_A (A:) DAP epimerase, diaminopimelate epimerase; enzyme-inhibitor complex, covalently bound inhibitor, isomerase; HET: ZDP; 1.35A {Haemophilus influenzae}
Probab=100.00  E-value=0  Score=323.32  Aligned_cols=270  Identities=35%  Similarity=0.587  Sum_probs=237.9

Q ss_pred             CEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCC-CCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             113785176773899947788878888899872035-6714355899825888886689999717876212332033223
Q gi|254780710|r    6 VDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTD-DNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCV   84 (296)
Q Consensus         6 i~F~Kmhg~GNDFiiiD~~~~~~~~~~~~i~~~~~~-~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~   84 (296)
                      |+|+|+|+.||+|+||+..+....++.+..++++.+ +|+++|+.+|+.|+.+..+|++|+|||+||||++|||||+||+
T Consensus         1 ~~F~~~~~~GN~~~Vv~~~~~~~~l~~~~~q~ia~e~r~~~~~~~~fv~~~~~~~~~~~~r~f~~~G~e~~~CGh~t~a~   80 (274)
T 2gke_A            1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCF   80 (274)
T ss_dssp             CEEEEEEETTEEEEEEECSSSCCCCCHHHHHHHHCTTTSCCCSEEEEEECCSSTTSSEEEEEEETTSCEESCCHHHHHHH
T ss_pred             CEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf             98999864998399997898867899999998756687857657999972778875506898606645765311388999


Q ss_pred             HHHHHCC--CCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEEC
Q ss_conf             1110013--57640379835883799985774277403687777776856565654344301105777740213099955
Q gi|254780710|r   85 VRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMGEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSM  162 (296)
Q Consensus        85 a~yl~~~--~~~~~~~i~T~~g~~~~~~~~~~~v~V~mG~p~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i  162 (296)
                      +++|+++  ...+.+.++|.+|.+.++...++.+.++++.|.+....+|.........   .......  ....+..+++
T Consensus        81 a~~l~~~~~~~~~~~~l~t~~g~~~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~  155 (274)
T 2gke_A           81 ARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKN---YILRTDI--QTVLCGAVSM  155 (274)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSCEEEEEECTTSCEEEECCCCBCCGGGTTCCCSSCCSS---EEEECSS--CEEEEEEEES
T ss_pred             HHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC---EEEECCC--CEEEEEEEEC
T ss_conf             9999862235431269996587247752136258741210235543244444444210---0330122--1178999951


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             87427974255768688876310002332375555146799728872899980467876656323589999999981788
Q gi|254780710|r  163 GNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHKT  242 (296)
Q Consensus       163 GNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ERGvGeTlACGTGA~Asa~~~~~~~~~  242 (296)
                      |+||++++++ +.+..++..+.+.++.++.|+++.|+.|++..+++.++.|+||||+|.|.+||||++|++++++..+++
T Consensus       156 g~~~l~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~f~p~~g~~ed~gTGsaa~~l~~~~~~~~  234 (274)
T 2gke_A          156 GNPHCVVQVD-DIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLL  234 (274)
T ss_dssp             SSEEEEEECS-CTTTSCHHHHHHHHHTCTTCTTCCEEEEEEEEETTEEEEEEEETTTEECSCCHHHHHHHHHHHHHTTSS
T ss_pred             CCCCEEEEEE-CCCHHHHHHHCHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             8996799960-310336977573553023212235540368832884999997577510245661178999999982989


Q ss_pred             CCCEEEECCCCEEEEEEE-CCCEEEEEECEEEEEEEEEEE
Q ss_conf             980799907957999995-898199994628999889984
Q gi|254780710|r  243 NRAVSVKMLGGGLLIEWH-DNNHVFMTGEAKKEWEGKLDI  281 (296)
Q Consensus       243 ~~~v~V~~pGG~L~v~~~-~~~~i~l~Gpa~~vf~G~~~i  281 (296)
                      ++...+..|||.+.+++. ++++|+++|+|.++++|++.|
T Consensus       235 ~~~~~~~~~~G~~~v~~~~~~~~v~i~G~a~~~~~g~~~i  274 (274)
T 2gke_A          235 NNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL  274 (274)
T ss_dssp             CSEEEEEETTEEEEEEECCTTSCEEEEECCEEEEEEECCC
T ss_pred             CCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEEEC
T ss_conf             9718999289779999987998899990529999999989