HHsearch alignment of GI: 254780710 and MMDB domain: 3fve_A_
>3fve_A (A:) DAP epimerase, diaminopimelate epimerase; alpha/beta, amino-acid biosynthesis, cytoplasm, isomerase, lysine biosynthesis; 2.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-43 Score=306.82 Aligned_cols=263 Identities=21% Similarity=0.261 Sum_probs=208.8
Q ss_pred CEEEEECCCCCCEEEEECCCCCCCCCHH-HHHHHCCCCCCCCCEEEEEE--------------CCCCCCCCEEEEEEECC
Q ss_conf 1137851767738999477888788888-99872035671435589982--------------58888866899997178
Q gi|254780710|r 6 VDFAKMEGIGNKILVIDMRGCHDNITSD-AINALSTDDNTHFDQIMLIH--------------DFQDASVDAFIRIINCD 70 (296)
Q Consensus 6 i~F~Kmhg~GNDFiiiD~~~~~~~~~~~-~i~~~~~~~giG~Dgli~i~--------------~~~~~~~d~~m~~fN~D 70 (296)
|+|+|||++||||+|+|........... ++..+.++.+++.||+++|. ++.++.+||+|+|||+|
T Consensus 2 ~~f~k~~~~Gn~~~ivd~f~~~~~~Gn~~av~~~~~~~~l~~~~~~~ia~~~~~~et~f~~~~~~~~~~~~~~~r~f~~~ 81 (290)
T 3fve_A 2 MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNAD 81 (290)
T ss_dssp EEEEEEESSSCEEEEEECTTCCSCCCHHHHHHHHCTTTSCCCSEEEEEEEHHHHHHTTSCSSCCTTCCTTSEEEEEEETT
T ss_pred CEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 87997343897099996897767999999998627788867787999714664332222234656665655699998899
Q ss_pred CCCCCCCCCHHHHHHHHHHCC--CCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEECCC
Q ss_conf 762123320332231110013--576403798358837999857742774036877777768565656543443011057
Q gi|254780710|r 71 GSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMGEPILDWKLIPLARSFDKMDRDRFHIGP 148 (296)
Q Consensus 71 GS~A~mCGNG~Rc~a~yl~~~--~~~~~~~i~T~~g~~~~~~~~~~~v~V~mG~p~~~~~~ip~~~~~~~~~~~~~~~~~ 148 (296)
|||+.|||||+||+|+||+++ ..+.++.++|.+|++.++...++...+.+..|.......+... .
T Consensus 82 G~E~~~CGh~t~~~a~~l~~~~~~~~~~~~~~t~~g~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 148 (290)
T 3fve_A 82 GSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMGKANRLGAGE-------------A 148 (290)
T ss_dssp SCBCCTTCTTHHHHHHHHHHTTSCCCSEEEEECTTCCEEEEEEEECSSEEEEEEECCCCEEEEEEE-------------B
T ss_pred CCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCC-------------C
T ss_conf 887765747899999999986887310166542157235565114454421685365322236542-------------1
Q ss_pred CCCCEECCEEEEECCCCEEEEECCCCCCHHHHHH---HHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCC
Q ss_conf 7774021309995587427974255768688876---3100023323755551467997288728999804678766563
Q gi|254780710|r 149 VNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLAS---FGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAAC 225 (296)
Q Consensus 149 ~~~~~~~~~~~v~iGNPH~Vi~v~d~i~~~~l~~---~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ERGvGeTlAC 225 (296)
........+..+++|+||++++++ +.+...... ..+.+...+.|+.++||.+++..+++.+++|+||||.|.|.+|
T Consensus 149 ~~~~~~~~~~~v~~g~~~~vv~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~R~f~~~~g~~ed~ 227 (290)
T 3fve_A 149 VVGGRRFHGLAVDVGNPHLACVDS-QLTVDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSC 227 (290)
T ss_dssp C-----CEEEEEESSSEEEEEEET-TCCTTTTCSCCCC--CCBCTTTCTTCCEEEEEECCBTTEEEEEEEBTTTBSCSCC
T ss_pred EEEEECCEEEEEECCCCEEEEEEC-CCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 233201105998058952899831-1000324456533751115545866202478997157832777532467866463
Q ss_pred HHHHHHHHHHHHHHCCCC-CCEEEECCCCEEEEEEECCCEEEEEECEEEEEEEEEEECC
Q ss_conf 235899999999817889-8079990795799999589819999462899988998413
Q gi|254780710|r 226 GSAACASVVASGCLHKTN-RAVSVKMLGGGLLIEWHDNNHVFMTGEAKKEWEGKLDIKT 283 (296)
Q Consensus 226 GTGA~Asa~~~~~~~~~~-~~v~V~~pGG~L~v~~~~~~~i~l~Gpa~~vf~G~~~i~~ 283 (296)
|||++|+++++++.++.. ..+++.++||.|+++|. ++.|+++|+|..+++|++.|..
T Consensus 228 ~TGsaa~~l~~~l~~~~~~~~~~v~~~gG~l~v~~~-~~~v~i~G~~~~v~~g~~~i~~ 285 (290)
T 3fve_A 228 GTGTVAAAVAALAAVGSPTGTLTVHVPGGEVVVTVT-DATSFLRGPSVLVARGDLADDW 285 (290)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEEETTEEEEEEEC-SSCEEEEEEEEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEE-CCCEEEECCCEEEEEEEECHHH
T ss_conf 277999999999976998975999979987999997-9979999087999999999999