HHsearch results for GI: 254780710 and protein with PDBid: 1tm0_A
>1tm0_A Proline racemase; structural genomics, alpha-beta protein THAT resembles double-beta barrel; 2.80A {Brucella melitensis 16M} SCOP: d.21.1.3
Probab=98.55 E-value=2.3e-05 Score=53.84 Aligned_cols=266 Identities=14% Similarity=0.090 Sum_probs=139.3
Q ss_pred CCCCEEEEECCCCCCEEEE-ECCCCCCCCCHHHH-----------HHHCC-CCCC-CCCEEEEEECCCCCCCCEEEEEEE
Q ss_conf 7541137851767738999-47788878888899-----------87203-5671-435589982588888668999971
Q gi|254780710|r 3 SSMVDFAKMEGIGNKILVI-DMRGCHDNITSDAI-----------NALST-DDNT-HFDQIMLIHDFQDASVDAFIRIIN 68 (296)
Q Consensus 3 ~~mi~F~Kmhg~GNDFiii-D~~~~~~~~~~~~i-----------~~~~~-~~gi-G~Dgli~i~~~~~~~~d~~m~~fN 68 (296)
+.||+-.-||..|+=+=|| ........-+-... +.|.. -+|- .-=|-++ .||.++.+|+-+-|++
T Consensus 4 ~~~i~~iD~Ht~GEP~RIV~~G~p~~~G~t~~ek~~~~~~~D~lR~~Lm~EPRGh~~M~Gall-~pp~~~~Ad~Gvif~~ 82 (350)
T 1tm0_A 4 TKVIHIVGCHAEGEVGDVIVGGVAPPPGETVWEQSRFIANDETLRNFVLNKPRGGVFRHVNLL-VPPKDPRAQMGFIIME 82 (350)
T ss_dssp SCCEEEEEEEETTEECEEEEESCCCCSSSSHHHHHHHHHHHCHHHHHHHSTTTSCSSCCEEEE-ECCCSSSCSEEEECCC
T ss_pred CCEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE-ECCCCCCCCEEEEEEC
T ss_conf 767999977789887379962888999989999999987403898997458998874588998-1899988767899974
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCC--C----CCCEEEEEECCCCEEEEEC-CCC-EEEECC-CCCCCCHH-HCCCCCCCCC
Q ss_conf 78762123320332231110013--5----7640379835883799985-774-277403-68777777-6856565654
Q gi|254780710|r 69 CDGSEVQSCGNGMRCVVRFLTSR--M----KRKSFTFETIRGILVAKEN-RDG-SISVDM-GEPILDWK-LIPLARSFDK 138 (296)
Q Consensus 69 ~DGS~A~mCGNG~Rc~a~yl~~~--~----~~~~~~i~T~~g~~~~~~~-~~~-~v~V~m-G~p~~~~~-~ip~~~~~~~ 138 (296)
++|-. .|||-|+=|++.+|.+. . +...+.++|.+|++.+... .++ -.+|.+ -.|+|... ++++..+
T Consensus 83 ~~Gy~-~MCGh~tI~~~t~lve~G~v~~~~p~t~v~ietPaGlV~a~~~~~~gkv~~V~f~nVpSf~~~~d~~v~vp--- 158 (350)
T 1tm0_A 83 PADTP-PMSGSNSICVSTVLLDSGIIAMQEPVTHMVLEAPGGIIEVEAECRNGKAERISVRNVPSFADRLDAPLDVT--- 158 (350)
T ss_dssp SSCCC-SCCHHHHHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEEECSSSEEEEEEECCCBEECCCSEEEECS---
T ss_pred CCCCC-CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEEECCHHHHCCCEEECC---
T ss_conf 77567-87743599999999985984578993388985798679999998599446999970055587589589868---
Q ss_pred CCCCEEECCCCCCCEECCEEEEECCCCEEEEECCC---CCC---HHHHHHHHHCCCCC-----CC-CCC--CCCEEEEEE
Q ss_conf 34430110577774021309995587427974255---768---68887631000233-----23-755--551467997
Q gi|254780710|r 139 MDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVED---DLY---HYDLASFGNLLAKH-----PM-FSE--GVNLSIARV 204 (296)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~v~iGNPH~Vi~v~d---~i~---~~~l~~~g~~i~~~-----~~-Fp~--gvNV~fv~v 204 (296)
... ....-.+.=||--+++-.++ ++. .-+|..+|..|+.. +. -|+ -..+.++++
T Consensus 159 -----------~~G-~V~vDiayGG~fYaiVda~~lgl~l~~~~~~~L~~~g~~ik~a~~~~~~~~HP~~~~~~i~~~~~ 226 (350)
T 1tm0_A 159 -----------GLG-TIMVDTAYGGDSFVIVDAAQIGMKIEPGQARELAEIGVKITKAANEQLGFRHPERDWRHISFCQI 226 (350)
T ss_dssp -----------SSS-EEEEEEEESSSEEEEEEGGGTC---CHHHHHHHHHHHHHHHCC------CCBTTBSCCSCCEEEE
T ss_pred -----------CCC-CEEEEEEECCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
T ss_conf -----------987-37988872661899984378256447436999999999999999860885689998564999997
Q ss_pred CCC-----CEEEEE---ECCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEECCCCEE-EEEEE---C-CC----EE
Q ss_conf 288-----728999---804678766563235899999999817889--807999079579-99995---8-98----19
Q gi|254780710|r 205 TSL-----ESLDLR---TWERGVGLTAACGSAACASVVASGCLHKTN--RAVSVKMLGGGL-LIEWH---D-NN----HV 265 (296)
Q Consensus 205 ~~~-----~~I~iR---t~ERGvGeTlACGTGA~Asa~~~~~~~~~~--~~v~V~~pGG~L-~v~~~---~-~~----~i 265 (296)
.++ +...-| +|--|.=----||||.+|-.+..+..|++. .+...++.=|.. +.++. + .+ -.
T Consensus 227 ~~~~~~~~~~~~~rn~vv~~~g~vDRSPcGTGTSARlA~l~akG~l~~Ge~~~~eSIiGs~F~g~i~~~~~~g~~~AVip 306 (350)
T 1tm0_A 227 TEPVTREGDVLTGVNTVAIRPAKFDRSPTGTGCSARMAVLHAKGQMKAGERFIGKSVLGTEFHCRLDKVLELGGKPAISP 306 (350)
T ss_dssp ECCCEESSSEEEECEEC----------CCHHHHHHHHHHHHHTTSCCTTCEEEECCC--CCEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCEEEE
T ss_conf 68887888752013678768885415898502999999999759977998399997137819999999989899487999
Q ss_pred EEEECEEEEEEEEEEECCCC
Q ss_conf 99946289998899841320
Q gi|254780710|r 266 FMTGEAKKEWEGKLDIKTGK 285 (296)
Q Consensus 266 ~l~Gpa~~vf~G~~~i~~~~ 285 (296)
..+|.|-..-+.++-+...+
T Consensus 307 ~I~G~A~itG~~~f~id~~D 326 (350)
T 1tm0_A 307 IISGRAWVTGTSQLMLDPSD 326 (350)
T ss_dssp EEEECEEEEEEEEECCCTTC
T ss_pred EEEEEEEEEEEEEEEECCCC
T ss_conf 99999999998899977999