HHsearch results for GI: 254780710 and protein with PDBid: 1u0k_A
>1u0k_A Gene product PA4716; sctructural genomics, MCSG, protein structure initiative, structural genomics, PSI; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.21.1.2 d.21.1.2
Probab=99.97 E-value=4.5e-31 Score=223.27 Aligned_cols=263 Identities=17% Similarity=0.173 Sum_probs=183.5
Q ss_pred EEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 37851767738999477888788888998720356714355899825888886689999717876212332033223111
Q gi|254780710|r 8 FAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCVVRF 87 (296)
Q Consensus 8 F~Kmhg~GNDFiiiD~~~~~~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~a~y 87 (296)
|++-+..||...|+-. ...++.+..+.++++.+. ---.||.|+.+ ..+++|+|||+|| |..|||+|++|++++
T Consensus 13 Ft~~~~~GNpaaVv~~---~~~l~~~~~q~iA~e~~~--seT~Fv~~~~~-~~~~~lr~Ftp~~-E~~~cGHatlaaa~~ 85 (288)
T 1u0k_A 13 FAERPLTGNGLAVFDD---ASALDDAAMQAWTRELRQ--FESIFLLPGDD-PRAFRARIFTLEE-ELPFAGHPLLGAAAL 85 (288)
T ss_dssp SCSSTTCSEEEEEESC---CTTCCHHHHHHHHHHHCC--SEEEEEEECSC-TTEEEEEEEESSC-BCCSCCTHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEC---CCCCCHHHHHHHHHHHCC--CEEEEEECCCC-CCEEEEEEECCCC-CHHHCCCCHHHHHHH
T ss_conf 6599998865699988---999899999999998699--87999966888-7718999977997-342068528889998
Q ss_pred HHCC---CCCCEEEEEECCCCEEEEECC-CCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEECCEEEEECC
Q ss_conf 0013---576403798358837999857-742774036877777768565656543443011057777402130999558
Q gi|254780710|r 88 LTSR---MKRKSFTFETIRGILVAKENR-DGSISVDMGEPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMG 163 (296)
Q Consensus 88 l~~~---~~~~~~~i~T~~g~~~~~~~~-~~~v~V~mG~p~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iG 163 (296)
|.+. .....+.++|..+........ +..+.+.+..+...+...+.....+.+. ..+.. .........+..+++|
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~v~~G 163 (288)
T 1u0k_A 86 LHHLRGGDNEQHWTLHLASKSVALRSVRAGSGFYAEMDQGRAEFGATPDAGTCRWFA-EAFSL-SANDLSGHPPRVVSTG 163 (288)
T ss_dssp HHHHHCCSSCEEEEEECSSCEEEEEEEEETTEEEEEEEEEECEECCCCCHHHHHHHH-HHTTC-CGGGBCSSCCEEEESS
T ss_pred HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHH-HHCCC-CHHHCCCCCCEEEECC
T ss_conf 865302578715899960454057776136410221246777556543345678887-64276-6122147781899669
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 742797425576868887631000233237555514679972887289998046-7876656323589999999981788
Q gi|254780710|r 164 NPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWER-GVGLTAACGSAACASVVASGCLHKT 242 (296)
Q Consensus 164 NPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~ER-GvGeTlACGTGA~Asa~~~~~~~~~ 242 (296)
|||+++++++ . .+... +.+..+..|++++|+.++.+.+++.+..|+||| |++||.||||++||.+.++.+.+..
T Consensus 164 ~~~lvv~v~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~p~~Gv~EDpatGSa~~ala~~l~~~~~~ 238 (288)
T 1u0k_A 164 LPYLLLPVTA-E---ALGRA-RQVNDLQEALDKLGAAFVYLLDVDGREGRTWDNLGLVEDVATGSAAGPVAAYLVEYGLA 238 (288)
T ss_dssp SCEEEEEBCH-H---HHHTC-CCCSCCHHHHHHHTCSEEEEEETTTTEEECBCTTSCSBCSCCHHHHHHHHHHHHHTTSS
T ss_pred CCEEEEEECH-H---HHHHC-CCHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9789999767-8---76425-77188886302486799998316751541105778888998641358999999982788
Q ss_pred CC--CEEEECC-----CCEEEEEEECCCEEEEEECEEEEEEEEEEECCC
Q ss_conf 98--0799907-----957999995898199994628999889984132
Q gi|254780710|r 243 NR--AVSVKML-----GGGLLIEWHDNNHVFMTGEAKKEWEGKLDIKTG 284 (296)
Q Consensus 243 ~~--~v~V~~p-----GG~L~v~~~~~~~i~l~Gpa~~vf~G~~~i~~~ 284 (296)
.. .+.+++. ||.|.+++..+++|+|+|+|..+++|++-+.++
T Consensus 239 ~~~~~~~~~QG~~~gr~g~l~v~~~~d~~V~i~G~a~~v~~G~l~~~~~ 287 (288)
T 1u0k_A 239 ARGEPFVLHQGRFLERPSRLDVQVATDGSVRVGGHVQLLARAELLTSAG 287 (288)
T ss_dssp CTTSCEEEEECGGGTCCEEEEEEECSSSEEEEEEEEEEEEEEEECSCC-
T ss_pred CCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEECC
T ss_conf 8880899982551389869999996899699998999999999995479