HHSEARCH alignment of GI: 254780710 and SCOP domain: d1qy9a1

Alignment
>d1qy9a1 d.21.1.2 (A:3-129) Hypothetical protein YddE {Escherichia coli [TaxId: 562]}
Probab=97.98  E-value=1.4e-05  Score=53.62  Aligned_cols=111  Identities=16%  Similarity=0.227  Sum_probs=73.4

Q ss_pred             EEEECCCCCCE-EEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf             37851767738-99947788878888899872035671435589982588888668999971787621233203322311
Q gi|254780710|r    8 FAKMEGIGNKI-LVIDMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCVVR   86 (296)
Q Consensus         8 F~Kmhg~GNDF-iiiD~~~~~~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~a~   86 (296)
                      |+.=.-.||-= |++|.    ..++.+..+.+++..+.  ---.|+.++.  ..++++|+|.+++ |-.+||.++-.+++
T Consensus         9 Ft~~~~~GNpa~Vv~~~----~~l~~~~mq~IA~e~n~--sETaFv~~~~--~~~~~iR~FTP~~-Ev~~cGHaTLAaa~   79 (127)
T d1qy9a1           9 FTSQPFRGNSAGVVFPA----DNLSEAQMQLIARELGH--SETAFLLHSD--DSDVRIRYFTPTV-EVPICGHATVAAHY   79 (127)
T ss_dssp             SCSSTTCSEEEEEEECC----TTCCHHHHHHHHHHHCC--SCEEEEECCS--SSSEEEEEECSSC-EESCCHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEECC----CCCCHHHHHHHHHHHCC--CEEEEEECCC--CCCEEEEEEECCC-CCCCCCCHHHHHHH
T ss_conf             87999995258999888----78999999999998599--6289984277--8858999980464-41246557889999


Q ss_pred             HHHCC--CCCCEEEEEECCCCEEEEECC-CCE--EEECCCCCCCCH
Q ss_conf             10013--576403798358837999857-742--774036877777
Q gi|254780710|r   87 FLTSR--MKRKSFTFETIRGILVAKENR-DGS--ISVDMGEPILDW  127 (296)
Q Consensus        87 yl~~~--~~~~~~~i~T~~g~~~~~~~~-~~~--v~V~mG~p~~~~  127 (296)
                      +|.+.  .....+.++|.+|.+.++... ++.  ++..++.|.|.+
T Consensus        80 ~L~~~~~~~~~~~~~~t~~G~l~v~v~~~~~~~~i~~~q~~P~f~p  125 (127)
T d1qy9a1          80 VRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEP  125 (127)
T ss_dssp             HHHHHHTCCSEEEEEEETTEEEEEEEEEETTEEEEEEECCCCEECC
T ss_pred             HHHHHCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCC
T ss_conf             9998448899779999467169999997399799990189985589


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Hypothetical protein YddE
species: Escherichia coli [TaxId: 562]