HHSEARCH alignment of GI: 254780710 and SCOP domain: d1qy9a2

Alignment
>d1qy9a2 d.21.1.2 (A:130-297) Hypothetical protein YddE {Escherichia coli [TaxId: 562]}
Probab=99.32  E-value=1.5e-12  Score=99.71  Aligned_cols=122  Identities=11%  Similarity=0.095  Sum_probs=79.2

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE----EECCCCEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf             999558742797425576868887631000233237555514679----9728872899980467876656323589999
Q gi|254780710|r  158 FVVSMGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIA----RVTSLESLDLRTWERGVGLTAACGSAACASV  233 (296)
Q Consensus       158 ~~v~iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv----~v~~~~~I~iRt~ERGvGeTlACGTGA~Asa  233 (296)
                      ..+++||||+++.++ +.+  .|..+.+-++....|++..|+.++    .......+.+|+|++++|.+..|+||++|++
T Consensus        26 ~~vs~G~~~~~v~v~-~~~--~l~~~~pd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~R~F~p~~Gi~EDpaTGsaa~a  102 (168)
T d1qy9a2          26 QVATTGHSKVMIPLK-PEV--DIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGP  102 (168)
T ss_dssp             EEEESSSCEEEEEBC-TTS--CGGGCCCCHHHHHHHHHHHTCCCEEEEEECTTSSEEEECEEEGGGTEEEESCCHHHHHH
T ss_pred             EEEECCCCEEEEEEC-CHH--HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf             999569986999978-989--96325999899996540058448999996698886999961576754553231045788


Q ss_pred             HHHHH--HCCCC---CC--EEEEC-----CCCEEEEEEECCC----EEEEEECEEEEEEEEEEEC
Q ss_conf             99998--17889---80--79990-----7957999995898----1999946289998899841
Q gi|254780710|r  234 VASGC--LHKTN---RA--VSVKM-----LGGGLLIEWHDNN----HVFMTGEAKKEWEGKLDIK  282 (296)
Q Consensus       234 ~~~~~--~~~~~---~~--v~V~~-----pGG~L~v~~~~~~----~i~l~Gpa~~vf~G~~~i~  282 (296)
                      ++++.  .+..+   ..  +.+.+     ..|.|.+++..++    .|++.|+|.+|++|+|.|.
T Consensus       103 la~yL~~~~~~~~~~~~~~~~~~QG~~~gr~~~l~v~~~~~~~~~~~V~vgG~av~v~~G~i~i~  167 (168)
T d1qy9a2         103 MGAWLVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIE  167 (168)
T ss_dssp             HHHHHHHTTCSCCCSSEEEEEEEECGGGTCCEEEEEEEEEETTEEEEEEEEECEEEEEEEECSSC
T ss_pred             HHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEE
T ss_conf             99999971777776670017985438848980589999705898877999836999999899996


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Hypothetical protein YddE
species: Escherichia coli [TaxId: 562]