HHSEARCH alignment of GI: 254780710 and SCOP domain: d1xuba1

Alignment
>d1xuba1 d.21.1.2 (A:1-128) Phenazine biosynthesis protein PhzF {Pseudomonas fluorescens [TaxId: 294]}
Probab=98.31  E-value=1.3e-06  Score=60.38  Aligned_cols=109  Identities=20%  Similarity=0.272  Sum_probs=81.8

Q ss_pred             EEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf             37851767738999477888788888998720356714355899825888886689999717876212332033223111
Q gi|254780710|r    8 FAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTHFDQIMLIHDFQDASVDAFIRIINCDGSEVQSCGNGMRCVVRF   87 (296)
Q Consensus         8 F~Kmhg~GNDFiiiD~~~~~~~~~~~~i~~~~~~~giG~Dgli~i~~~~~~~~d~~m~~fN~DGS~A~mCGNG~Rc~a~y   87 (296)
                      |+.-...||---|+-   ....++.++.+.++++.+.  ---.|+.++.+ ..++++|||.+++ |-.+||.++-..++.
T Consensus        10 Ft~~~~~GNpaaVv~---~~~~L~~~~mq~IA~e~~~--sETaFv~~~~~-~~~~~vR~FtP~~-Ev~~cGH~tlaaa~~   82 (128)
T d1xuba1          10 FASVPLEGNPVAVFF---DADDLPPAQMQRIAREMNL--SESTFVLKPRN-GGDALIRIFTPVN-ELPFAGAPLLGTAIA   82 (128)
T ss_dssp             TCSSTTSSEEEEEEC---SGGGSCHHHHHHHHHHHCS--SCEEEEECCSS-SSSEEEEEECSSC-EESCCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEE---CCCCCCHHHHHHHHHHHCC--CCEEEEECCCC-CCCEEEEEEECCC-CCCCCCCHHHHHHHH
T ss_conf             659999965249998---8978999999999998499--83799836877-7855899980565-333355178999999


Q ss_pred             HHCCCCCCEEEEEECCCCEEEEECC--CCEEEECCCCC
Q ss_conf             0013576403798358837999857--74277403687
Q gi|254780710|r   88 LTSRMKRKSFTFETIRGILVAKENR--DGSISVDMGEP  123 (296)
Q Consensus        88 l~~~~~~~~~~i~T~~g~~~~~~~~--~~~v~V~mG~p  123 (296)
                      |.++....++.++|.+|.+.++...  ...+.+.|..|
T Consensus        83 l~~~~~~~~~~~~t~aG~v~v~~~~~~~~~~~~~~~~p  120 (128)
T d1xuba1          83 LGAHTDNHRLYLETQMGTIAFELERQNGSVIAASMDQP  120 (128)
T ss_dssp             HHTTCCCSEEEEEETTEEEEEEEEEETTEEEEEEEECC
T ss_pred             HHHCCCCCEEEEEECCEEEEEEEEECCCCEEEEEECCC
T ss_conf             98415996099993870699999924996999997299


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Phenazine biosynthesis protein PhzF
species: Pseudomonas fluorescens [TaxId: 294]