HHSEARCH alignment of GI: 254780710 and SCOP domain: d1xuba2

Alignment
>d1xuba2 d.21.1.2 (A:129-278) Phenazine biosynthesis protein PhzF {Pseudomonas fluorescens [TaxId: 294]}
Probab=99.27  E-value=9.5e-11  Score=87.74  Aligned_cols=119  Identities=15%  Similarity=0.078  Sum_probs=90.9

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEC--CCCCCCCCCCHHHHHHHHHH
Q ss_conf             9995587427974255768688876310002332375555146799728872899980--46787665632358999999
Q gi|254780710|r  158 FVVSMGNPHAIFFVEDDLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTW--ERGVGLTAACGSAACASVVA  235 (296)
Q Consensus       158 ~~v~iGNPH~Vi~v~d~i~~~~l~~~g~~i~~~~~Fp~gvNV~fv~v~~~~~I~iRt~--ERGvGeTlACGTGA~Asa~~  235 (296)
                      ..+++|+||+++.++ +.  ..|..+.|-++....|+...++-|..-  ...+..|.|  +.|+.|.-||||+++|.+.+
T Consensus        19 ~~~~~G~~~~~v~v~-~~--~al~~~~pd~~~~~~~~~~~~~~~~~~--~~~~~~R~F~p~~Gi~EDpaTGSa~~aLa~y   93 (150)
T d1xuba2          19 EIYHNGPRHVFVGLP-SI--DALSALHPDHRALSNFHDMAINCFAGA--GRRWRSRMFSPAYGVVEDAATGSAAGPLAIH   93 (150)
T ss_dssp             EEEESSSEEEEEECS-SH--HHHHHCCCCHHHHTTSCSCEEEEEEEE--TTEEEEEEEBGGGTBSSCSCCHHHHHHHHHH
T ss_pred             EEEECCCCEEEEEEC-CH--HHHHHCCCCHHHHHHCCCCEEEEEECC--CCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf             899669987999989-87--778765879899975686059998222--7751589970212345275303568999999


Q ss_pred             HHHHCCCC--CCEEEEC-----CCCEEEEEEECCC----EEEEEECEEEEEEEEEEE
Q ss_conf             99817889--8079990-----7957999995898----199994628999889984
Q gi|254780710|r  236 SGCLHKTN--RAVSVKM-----LGGGLLIEWHDNN----HVFMTGEAKKEWEGKLDI  281 (296)
Q Consensus       236 ~~~~~~~~--~~v~V~~-----pGG~L~v~~~~~~----~i~l~Gpa~~vf~G~~~i  281 (296)
                      ....+..+  ..+.+.+     .+|.|.+++..++    .|++.|+|..+++|++.|
T Consensus        94 l~~~~~~~~~~~~~~~QG~~~gR~s~l~v~~~~~~~~~~~V~vgG~av~v~~G~i~l  150 (150)
T d1xuba2          94 LARHGQIEFGQPVEILQGVEIGRPSLMFAKAEGRAEQLTRVEVSGNGVTFGRGTIVL  150 (150)
T ss_dssp             HHHTTSSCTTCCEEEEECGGGTCCEEEEEEEEEETTEEEEEEEEEEEEEEEEEEECC
T ss_pred             HHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEC
T ss_conf             998189888817999940044999759999973799577899982799999999989


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Phenazine biosynthesis protein PhzF
species: Pseudomonas fluorescens [TaxId: 294]