PSIBLAST alignment of GI: 254780710 and protein with PDB id: 1gqz
gi|33356940|pdb|1GQZ|A Chain A, Refinement Of Haemophilus Influenzae Diaminopimelate Epimerase At 1.7a Length = 274
>gi|109157880|pdb|2GKE|A Chain A, Crystal Structure Of Diaminopimelate Epimerase In Complex With An Irreversible Inhibitor Ll-Azidap Length = 274
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 96/280 (34%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 6 VDFAKMEGIGNKILVIDMRGCHDNITSDAINALS-TDDNTHFDQIMLIHDFQDASVDAFI 64
+ F+KM G+GN +V+D + T + I L+ FDQ++++ D +D
Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60
Query: 65 RIINCDGSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMGE 122
RI N DGSEV CGNG RC RF+T + +K + T +G +V D I V+MGE
Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120
Query: 123 PILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLAS 182
PI + IP + + + + VSMGNPH + V+ D+ ++
Sbjct: 121 PIWEPAKIPFTAN-----KFEKNYILRTDIQTVLCGAVSMGNPHCVVQVD-DIQTANVEQ 174
Query: 183 FGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHKT 242
G LL H F E VN ++ + E + LR +ERG G T ACGS ACA+V
Sbjct: 175 LGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLL 234
Query: 243 NRAVSVKMLGGGLLIEWHDNNH-VFMTGEAKKEWEGKLDI 281
N V V + GG L+IEW+ H ++MTGEA ++G + +
Sbjct: 235 NNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274