RPSBLAST alignment for GI: 254780710 and conserved domain: COG0253

>gnl|CDD|30602 COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]. Length = 272
 Score =  250 bits (641), Expect = 3e-67
 Identities = 110/281 (39%), Positives = 155/281 (55%), Gaps = 14/281 (4%)

Query: 6   VDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTDDNTH--FDQIMLIHDFQDASVDAF 63
           ++F+KM G+GN  +V+D     D  T +   AL  D +     D ++ +   +    D  
Sbjct: 1   MEFSKMHGLGNDFIVVDEFDKKDEETPELARALC-DRHFGIGADGVLFVEPPRSPGADFH 59

Query: 64  IRIINCDGSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMG 121
           +RI N DGSE + CGNG RC  RFL  R  +K+K  + ET+ GIL  K + D ++SVDMG
Sbjct: 60  LRIFNSDGSEAEMCGNGARCFARFLAERGLVKKKEISVETLAGILKVKVHDDNTVSVDMG 119

Query: 122 EPILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLA 181
            P      IPL    ++   +++ +G     F      VSMGNPH + FV DD+   +L 
Sbjct: 120 LPSFKPAEIPLL---EEKVEEQYGLGEETVTFY----AVSMGNPHLVIFV-DDVETANLE 171

Query: 182 SFGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHK 241
             G LL  H +F EGVN+   +V S +++ LR +ERG G T ACG+ ACA+ V +  L  
Sbjct: 172 ELGPLLESHELFPEGVNVGFVQVLSRDAIRLRVYERGAGETLACGTGACAAAVVAARLGL 231

Query: 242 TNRAVSVKMLGGGLLIEW-HDNNHVFMTGEAKKEWEGKLDI 281
            +R V+V + GG L IEW  D   V+MTG A +  EGKL I
Sbjct: 232 LDRKVTVHLPGGTLEIEWKDDGKPVYMTGPATRVAEGKLYI 272