RPSBLAST alignment of GI: 254780710 and SCOP domain: d1qy9a2

Alignment

>d1qy9a2 d.21.1.2 (A:130-297) Hypothetical protein YddE {Escherichia coli [TaxId: 562]} Length = 168

 Score = 52.5 bits (125), Expect = 4e-08
 Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 23/146 (15%)

Query: 157 PFVVSMGNPHAIFFVED----DLYHYDLASFGNLLAKHPMFSEGVNLSIARVTSLESLDL 212
             V + G+   +  ++     D    DL +   +  K      G              D 
Sbjct: 25  IQVATTGHSKVMIPLKPEVDIDALSPDLNALTAISKKIGC--NGFFP-FQIRPGKNETDG 81

Query: 213 RTWERGVGLTAACGSAACASVVASGCLHK----------TNRAVSVKMLGGGLLIE---- 258
           R +   +G+     +      + +  +H             +    + LG   +IE    
Sbjct: 82  RMFSPAIGIVEDPVTGNANGPMGAWLVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVT 141

Query: 259 --WHDNNHVFMTGEAKKEWEGKLDIK 282
              +    V ++G A   +  +  I+
Sbjct: 142 IRDNQPEKVTISGTAVILFHAEWAIE 167

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Diaminopimelate epimerase-like
superfamily: Diaminopimelate epimerase-like
family: PhzC/PhzF-like
domain: Hypothetical protein YddE
species: Escherichia coli [TaxId: 562]