HHsearch alignment for GI: 254780711 and conserved domain: CHL00181

Probab=97.20  E-value=0.023  Score=38.32  Aligned_cols=124  Identities=23%  Similarity=0.217  Sum_probs=61.2

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
Q ss_conf             98999999999999998524696999999999999983031112699899999999999998718774210002588418
Q gi|254780711|r   23 SETDISNTLREIRRTFLEADVSLEVVQSFSKRVQEKAKGEKILRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLV  102 (461)
Q Consensus        23 ~e~~i~~~l~ei~~aLLeaDV~~~vv~~~~~~Ik~k~~~~~~~~~~~~~~~i~kiv~~eL~~lLg~~~~~l~~~~~~p~v  102 (461)
T Consensus        10 ~~~~lee~L~eLd~e----liGL~~VK~~v~~l~~~~~~------------------~~~R~~~G-----l~~~~-~s~h   61 (287)
T CHL00181         10 NKTQIQEVLDELDEE----LIGLVPVKTRIREIAALLLV------------------DRLRKNLG-----LVSSS-PGLH   61 (287)
T ss_pred             HHCCHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHH------------------HHHHHHCC-----CCCCC-CCCE
T ss_conf             453499999999886----46969999999999999999------------------99999879-----99888-7653


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9962344333468899999999861489-507820542210047799998510347422233210368999999999974
Q gi|254780711|r  103 IMLVGLQGSGKTTTTAKIAYHLKTLKKK-KILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARD  181 (461)
Q Consensus       103 IllvGl~GsGKTTT~aKLA~~~~~~~~~-kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~  181 (461)
T Consensus        62 ~vF~GnPGTGKTTVARl~a~il~~lG~L~~g~vve~~-----------------r~dLvg~yvG~Ta~k-t~~~i~~a~G  123 (287)
T CHL00181         62 MSFTGSPGTGKTTVALKMADILYRLGYIKKGHLITVT-----------------RDDLVGQYIGHTAPK-TKEVLKKAMG  123 (287)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC-----------------HHHHCCCCCCCCHHH-HHHHHHHCCC
T ss_conf             8887899867999999999999986995589589953-----------------588416353521699-9999996459


Q ss_pred             CCCCEEEEECCCCC
Q ss_conf             15886998334422
Q gi|254780711|r  182 GGYDAVILDTAGRN  195 (461)
Q Consensus       182 ~~~D~iiiDTaGR~  195 (461)
T Consensus       124 ---GVLfIDEAY~L  134 (287)
T CHL00181        124 ---GVLFIDEAYYL  134 (287)
T ss_pred             ---CEEEEECHHHH
T ss_conf             ---87998244653