HHsearch alignment for GI: 254780711 and conserved domain: COG0003

Probab=98.21  E-value=8.5e-06  Score=64.45  Aligned_cols=97  Identities=28%  Similarity=0.419  Sum_probs=58.6

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-------------HHHH---------H---H-HHHHH
Q ss_conf             4189962344333468899999999861489507820542210-------------0477---------9---9-99851
Q gi|254780711|r  100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRP-------------AAQE---------Q---L-RYLGE  153 (461)
Q Consensus       100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~-------------aA~e---------Q---L-~~~a~  153 (461)
T Consensus         2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~-g~kvLlvStDPAhsL~d~f~~elg~~~~~I~~nL~a~eiD~~~~l~ey~~~   80 (322)
T COG0003           2 TRIVFFTGKGGVGKTTIAAATAVKLAES-GKKVLLVSTDPAHSLGDVFDLELGHDPRKVGPNLDALELDPEKALEEYWDE   80 (322)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHH
T ss_conf             3799993688545899999999999975-990799984898744765423047851125888754660689999999999


Q ss_pred             -------CCCC--------CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             -------0347--------4222332103689999999999741588699833442221
Q gi|254780711|r  154 -------QIQV--------DTLEVIPEQSPEKIAIRATQSARDGGYDAVILDTAGRNHI  197 (461)
Q Consensus       154 -------~~~v--------~~~~~~~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~  197 (461)
T Consensus        81 v~~~~~~~~~~~~l~~~~~~e~~~~PGidE~~~l~~i~e~~~~~~yD~IV~DtaPTG~T  139 (322)
T COG0003          81 VKDYLARLLRTRGLGGIYADELATLPGIDEALALLKILEYYVSGEYDVIVVDTAPTGHT  139 (322)
T ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
T ss_conf             99999741265542125788986098889999999999987526898899848970878