HHsearch alignment for GI: 254780711 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=98.31 E-value=3.4e-06 Score=67.46 Aligned_cols=169 Identities=23% Similarity=0.252 Sum_probs=119.6
Q ss_pred CCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC---CHHHHHH
Q ss_conf 5884-18996234433346889999999986148950782054221004779999851034742223321---0368999
Q gi|254780711|r 97 APSP-LVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE---QSPEKIA 172 (461)
Q Consensus 97 ~~~p-~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~---~dp~~i~ 172 (461)
T Consensus 9 ~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~~--~~~aVI~~Di~t~~Da~~l~~~---~g~~i~~v~TG~~CH~da~m~ 83 (202)
T COG0378 9 KNRPMLRIGVGGPPGSGKTALIEKTLRALKDE--YKIAVITGDIYTKEDADRLRKL---PGEPIIGVETGKGCHLDASMN 83 (202)
T ss_pred HCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH--CCEEEEECEEECHHHHHHHHHC---CCCEEEEECCCCCCCCCHHHH
T ss_conf 25864899961799867899999999999752--7768996404006559999737---798068740387658867889
Q ss_pred HHHHHHHHHCC--CCEEEEECCCCCCC--HHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHH--HHHHHHCCCCCEE
Q ss_conf 99999997415--88699833442221--124689999998513851100031011122568888--9887635844077
Q gi|254780711|r 173 IRATQSARDGG--YDAVILDTAGRNHI--NDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLA--RNFDKIVDLTGII 246 (461)
Q Consensus 173 ~~a~~~a~~~~--~D~iiiDTaGR~~~--d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a--~~F~~~~~i~giI 246 (461)
T Consensus 84 ~~ai~~l~~~~~~~Dll~iEs~GNL~~~~sp~L-----------~d~~~v~VidvteGe~~P~K~gP~i~~----aDllV 148 (202)
T COG0378 84 LEAIEELVLDFPDLDLLFIESVGNLVCPFSPDL-----------GDHLRVVVIDVTEGEDIPRKGGPGIFK----ADLLV 148 (202)
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCEECCCCCCH-----------HHCEEEEEEECCCCCCCCCCCCCCEEE----EEEEE
T ss_conf 999999863177677899923764324468041-----------304699999878888876557996467----41899
Q ss_pred EEECCCCCCCCHHHHHHHH------HCCCHHHEE--CCCCCCCCCCC
Q ss_conf 6411576633036777888------478730261--58672321001
Q gi|254780711|r 247 LTRMDGDGRGGAALSMRTV------TGKPIKAIG--TGEKINDLENF 285 (461)
Q Consensus 247 lTKlD~~akgG~als~~~~------~~~PI~fig--~GE~~~dle~F 285 (461)
T Consensus 149 InK~DLa~~v~~dlevm~~da~~~np~~~ii~~n~ktg~G~~~~~~~ 195 (202)
T COG0378 149 INKTDLAPYVGADLEVMARDAKEVNPEAPIIFTNLKTGEGLDEWLRF 195 (202)
T ss_pred EEHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 85677387728669999999998499998899847878689999999