HHsearch alignment for GI: 254780711 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=98.31  E-value=3.4e-06  Score=67.46  Aligned_cols=169  Identities=23%  Similarity=0.252  Sum_probs=119.6

Q ss_pred             CCCC-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC---CHHHHHH
Q ss_conf             5884-18996234433346889999999986148950782054221004779999851034742223321---0368999
Q gi|254780711|r   97 APSP-LVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE---QSPEKIA  172 (461)
Q Consensus        97 ~~~p-~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~---~dp~~i~  172 (461)
T Consensus         9 ~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~~--~~~aVI~~Di~t~~Da~~l~~~---~g~~i~~v~TG~~CH~da~m~   83 (202)
T COG0378           9 KNRPMLRIGVGGPPGSGKTALIEKTLRALKDE--YKIAVITGDIYTKEDADRLRKL---PGEPIIGVETGKGCHLDASMN   83 (202)
T ss_pred             HCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH--CCEEEEECEEECHHHHHHHHHC---CCCEEEEECCCCCCCCCHHHH
T ss_conf             25864899961799867899999999999752--7768996404006559999737---798068740387658867889


Q ss_pred             HHHHHHHHHCC--CCEEEEECCCCCCC--HHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHH--HHHHHHCCCCCEE
Q ss_conf             99999997415--88699833442221--124689999998513851100031011122568888--9887635844077
Q gi|254780711|r  173 IRATQSARDGG--YDAVILDTAGRNHI--NDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLA--RNFDKIVDLTGII  246 (461)
Q Consensus       173 ~~a~~~a~~~~--~D~iiiDTaGR~~~--d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a--~~F~~~~~i~giI  246 (461)
T Consensus        84 ~~ai~~l~~~~~~~Dll~iEs~GNL~~~~sp~L-----------~d~~~v~VidvteGe~~P~K~gP~i~~----aDllV  148 (202)
T COG0378          84 LEAIEELVLDFPDLDLLFIESVGNLVCPFSPDL-----------GDHLRVVVIDVTEGEDIPRKGGPGIFK----ADLLV  148 (202)
T ss_pred             HHHHHHHHHCCCCCCEEEEECCCCEECCCCCCH-----------HHCEEEEEEECCCCCCCCCCCCCCEEE----EEEEE
T ss_conf             999999863177677899923764324468041-----------304699999878888876557996467----41899


Q ss_pred             EEECCCCCCCCHHHHHHHH------HCCCHHHEE--CCCCCCCCCCC
Q ss_conf             6411576633036777888------478730261--58672321001
Q gi|254780711|r  247 LTRMDGDGRGGAALSMRTV------TGKPIKAIG--TGEKINDLENF  285 (461)
Q Consensus       247 lTKlD~~akgG~als~~~~------~~~PI~fig--~GE~~~dle~F  285 (461)
T Consensus       149 InK~DLa~~v~~dlevm~~da~~~np~~~ii~~n~ktg~G~~~~~~~  195 (202)
T COG0378         149 INKTDLAPYVGADLEVMARDAKEVNPEAPIIFTNLKTGEGLDEWLRF  195 (202)
T ss_pred             EEHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
T ss_conf             85677387728669999999998499998899847878689999999