HHsearch alignment for GI: 254780711 and conserved domain: COG0455
>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].
Probab=97.65 E-value=0.0015 Score=47.27 Aligned_cols=145 Identities=26% Similarity=0.275 Sum_probs=80.9
Q ss_pred CEEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH-------------HHHHHHHHH---------CCC
Q ss_conf 4189962-34433346889999999986148950782054221004-------------779999851---------034
Q gi|254780711|r 100 PLVIMLV-GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAA-------------QEQLRYLGE---------QIQ 156 (461)
Q Consensus 100 p~vIllv-Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA-------------~eQL~~~a~---------~~~ 156 (461)
T Consensus 2 ~~~Iav~SgKGGvGKTtitanlga~~~~~~~k~V~~iDaD~g~~nL~~~~g~~~~~~~l~dvL~~~~~~~Di~~~~~~~g 81 (262)
T COG0455 2 TKVIAVVSGKGGVGKTTITANLGAALAALGGKVVLLIDADLGLGNLSLLLGVESKPTTLHDVLAGEASIEDIIYETPQDG 81 (262)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCCCC
T ss_conf 78999984588756898998699999964897699996588887288885888885509999707787768023157689
Q ss_pred CCCCCCCCCCHHHHHH-------HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC-C-H
Q ss_conf 7422233210368999-------99999997415886998334422211246899999985138511000310111-2-2
Q gi|254780711|r 157 VDTLEVIPEQSPEKIA-------IRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT-G-Q 227 (461)
Q Consensus 157 v~~~~~~~~~dp~~i~-------~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~-G-q 227 (461)
T Consensus 82 l~vipg~--~~~~~~~~~~~~~~~~~~~~l-~~~~D~iliD~~aGl~~~~-----~~~~~~---sd~~viVt~pe~~si~ 150 (262)
T COG0455 82 LYVLPGG--SGLEDLAKLDPEDLEDVIKEL-EELYDYILIDTGAGLSRDT-----LSFILS---SDELVIVTTPEPTSIT 150 (262)
T ss_pred EEEEECC--CCHHHHHHCCHHHHHHHHHHH-HHCCCEEEEECCCCCCHHH-----HHHHHH---CCCEEEEECCCCCHHH
T ss_conf 8996078--876888616988899999998-7529999996899966888-----999873---6817999279852089
Q ss_pred HHHHHHHH-HHHHCCCCC--EEEEECCCCCC
Q ss_conf 56888898-876358440--77641157663
Q gi|254780711|r 228 DAVHLARN-FDKIVDLTG--IILTRMDGDGR 255 (461)
Q Consensus 228 ~a~~~a~~-F~~~~~i~g--iIlTKlD~~ak 255 (461)
T Consensus 151 ~A~~~i~~~~~~~~~~~~~~vV~N~v~~~~e 181 (262)
T COG0455 151 DAYKTIKILSKLGLDLLGRRVVLNRVRSTKE 181 (262)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 9999999999738764331589970366665