HHsearch alignment for GI: 254780711 and conserved domain: COG0468

>COG0468 RecA RecA/RadA recombinase [DNA replication, recombination, and repair].
Probab=97.03  E-value=0.0098  Score=41.07  Aligned_cols=96  Identities=16%  Similarity=0.115  Sum_probs=67.8

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r  100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA  179 (461)
Q Consensus       100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a  179 (461)
T Consensus        60 g~ItEiyG~~gsGKT~lal~~~~~aq~~g~~a~fIDtE~~l~p~r~~~l~~~~-~d~l~v~~~~~~e~q~~i~~~~~~~~  138 (279)
T COG0468          60 GRITEIYGPESSGKTTLALQLVANAQKPGGKAAFIDTEHALDPERAKQLGVDL-LDNLLVSQPDTGEQQLEIAEKLARSG  138 (279)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH-HCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf             35899846887654668999988865379808999589998999999988754-21536866897799999999998754


Q ss_pred             HHCCCCEEEEECCCCCCC
Q ss_conf             741588699833442221
Q gi|254780711|r  180 RDGGYDAVILDTAGRNHI  197 (461)
Q Consensus       180 ~~~~~D~iiiDTaGR~~~  197 (461)
T Consensus       139 ~~-~i~LvVVDSvaa~~r  155 (279)
T COG0468         139 AE-KIDLLVVDSVAALVR  155 (279)
T ss_pred             CC-CCCEEEEECCCCCCH
T ss_conf             68-878899825743463