HHsearch alignment for GI: 254780711 and conserved domain: COG1100
>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=95.73 E-value=0.028 Score=37.60 Aligned_cols=90 Identities=20% Similarity=0.202 Sum_probs=53.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 18996234433346889999999986148950782054221004779999851034742223321036899999999997
Q gi|254780711|r 101 LVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSAR 180 (461)
Q Consensus 101 ~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~ 180 (461)
T Consensus 6 ~kivv~G~~g~GKTtl~~~l~~~~~~-~~~~~t~~~---------------------~~~~~~~~~~------------- 50 (219)
T COG1100 6 FKIVVLGDGGVGKTTLLNRLVGDEFP-EGYPPTIGN---------------------LDPAKTIEPY------------- 50 (219)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCEEE---------------------CCCCCEEECC-------------
T ss_conf 79999999999889999999647676-556761454---------------------0432036226-------------
Q ss_pred HCCCCEEEEECCCCCCCHHHHHHHHHHHHHH--CCCCCCCCCCCHHCCHHHHHHH
Q ss_conf 4158869983344222112468999999851--3851100031011122568888
Q gi|254780711|r 181 DGGYDAVILDTAGRNHINDSLMQEISEIKSL--TNPHEILLVADALTGQDAVHLA 233 (461)
Q Consensus 181 ~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~--~~p~e~~lV~da~~Gq~a~~~a 233 (461)
T Consensus 51 ~~~~~~~~~Dt~g--------q~~~~~~~~~y~~~~~~~l~~~d~~~~~~~~~~~ 97 (219)
T COG1100 51 RRNIKLQLWDTAG--------QEEYRSLRPEYYRGANGILIVYDSTLRESSDELT 97 (219)
T ss_pred CCCEEEEEEECCC--------HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH
T ss_conf 6600267676798--------6999998875043897899999762056578899