HHsearch alignment for GI: 254780711 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=95.41  E-value=0.19  Score=31.30  Aligned_cols=97  Identities=20%  Similarity=0.140  Sum_probs=52.3

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-EEEECCCCCCCHHHHHH-HHHHHCC-CCCCCCCCCCCHHHHHHHH
Q ss_conf             8841899623443334688999999998614895-07820542210047799-9985103-4742223321036899999
Q gi|254780711|r   98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKK-ILMASLDVHRPAAQEQL-RYLGEQI-QVDTLEVIPEQSPEKIAIR  174 (461)
Q Consensus        98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~k-V~lv~~Dt~R~aA~eQL-~~~a~~~-~v~~~~~~~~~dp~~i~~~  174 (461)
T Consensus        40 ~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~--t~~~i~~~i~~~~~~~p~~g~~~-~~~~~~l~~  116 (366)
T COG1474          40 ERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELR--TPYQVLSKILNKLGKVPLTGDSS-LEILKRLYD  116 (366)
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC--CHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHH
T ss_conf             998607998899987328999999999733156757999513078--78799999999826899767632-689999999


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCHH
Q ss_conf             9999974158869983344222112
Q gi|254780711|r  175 ATQSARDGGYDAVILDTAGRNHIND  199 (461)
Q Consensus       175 a~~~a~~~~~D~iiiDTaGR~~~d~  199 (461)
T Consensus       117 ~~~~--~~~~~IvvLDEid~L~~~~  139 (366)
T COG1474         117 NLSK--KGKTVIVILDEVDALVDKD  139 (366)
T ss_pred             HHHH--CCCEEEEEECCHHHHHCCC
T ss_conf             7774--1875999976476541546