HHsearch alignment for GI: 254780711 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=95.41 E-value=0.19 Score=31.30 Aligned_cols=97 Identities=20% Similarity=0.140 Sum_probs=52.3
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-EEEECCCCCCCHHHHHH-HHHHHCC-CCCCCCCCCCCHHHHHHHH
Q ss_conf 8841899623443334688999999998614895-07820542210047799-9985103-4742223321036899999
Q gi|254780711|r 98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKK-ILMASLDVHRPAAQEQL-RYLGEQI-QVDTLEVIPEQSPEKIAIR 174 (461)
Q Consensus 98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~k-V~lv~~Dt~R~aA~eQL-~~~a~~~-~v~~~~~~~~~dp~~i~~~ 174 (461)
T Consensus 40 ~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~--t~~~i~~~i~~~~~~~p~~g~~~-~~~~~~l~~ 116 (366)
T COG1474 40 ERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELR--TPYQVLSKILNKLGKVPLTGDSS-LEILKRLYD 116 (366)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC--CHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHH
T ss_conf 998607998899987328999999999733156757999513078--78799999999826899767632-689999999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCHH
Q ss_conf 9999974158869983344222112
Q gi|254780711|r 175 ATQSARDGGYDAVILDTAGRNHIND 199 (461)
Q Consensus 175 a~~~a~~~~~D~iiiDTaGR~~~d~ 199 (461)
T Consensus 117 ~~~~--~~~~~IvvLDEid~L~~~~ 139 (366)
T COG1474 117 NLSK--KGKTVIVILDEVDALVDKD 139 (366)
T ss_pred HHHH--CCCEEEEEECCHHHHHCCC
T ss_conf 7774--1875999976476541546