HHsearch alignment for GI: 254780711 and conserved domain: COG3640
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning].
Probab=97.80 E-value=0.00076 Score=49.54 Aligned_cols=170 Identities=19% Similarity=0.271 Sum_probs=102.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH----------------HHHHHC-CC---CCCCC
Q ss_conf 89962344333468899999999861489507820542210047799----------------998510-34---74222
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQL----------------RYLGEQ-IQ---VDTLE 161 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL----------------~~~a~~-~~---v~~~~ 161 (461)
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp-d~nL~~~LGve~~~~~lg~~~e~~~k~~~a~~~~~~~~~fk 80 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP-DSNLPEALGVEEPMKYLGGKRELLKKRTGAEPGGPPGEMFK 80 (255)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 69996599765899999999999864895499994899-99907762999987553008999999861478999553001
Q ss_pred CC-------------------------C--CC---HHH-HHHHHHHHHHHHCCCCEEEEEC-CCCCCCHHHHHHHHHHHH
Q ss_conf 33-------------------------2--10---368-9999999999741588699833-442221124689999998
Q gi|254780711|r 162 VI-------------------------P--EQ---SPE-KIAIRATQSARDGGYDAVILDT-AGRNHINDSLMQEISEIK 209 (461)
Q Consensus 162 ~~-------------------------~--~~---dp~-~i~~~a~~~a~~~~~D~iiiDT-aGR~~~d~~lm~El~~i~ 209 (461)
T Consensus 81 ~~~~~~di~~e~~~e~~~~~LLvmGkie~~GeGC~Cp~~allR~~l~~l~~~~~e~VivDtEAG-----------iEHfg 149 (255)
T COG3640 81 ENPLVSDLPDEYLVENGDIDLLVMGKIEEGGEGCACPMNALLRRLLRHLILNRYEVVIVDTEAG-----------IEHFG 149 (255)
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC-----------HHHHC
T ss_conf 3754335169885006880079952556799743162789999999997516674899963345-----------66656
Q ss_pred HHC--CCCCCCCCCCHHCCHHHHHHHHHHHHH---CCCC--CEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCC
Q ss_conf 513--851100031011122568888988763---5844--077641157663303677788847873026158672321
Q gi|254780711|r 210 SLT--NPHEILLVADALTGQDAVHLARNFDKI---VDLT--GIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDL 282 (461)
Q Consensus 210 ~~~--~p~e~~lV~da~~Gq~a~~~a~~F~~~---~~i~--giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dl 282 (461)
T Consensus 150 Rg~~~~vD~vivVvDpS~--~sl~taeri~~L~~elg~k~i~~V~NKv~e~---e~~~~~-~~~~~~~~vlg-------~ 216 (255)
T COG3640 150 RGTIEGVDLVIVVVDPSY--KSLRTAERIKELAEELGIKRIFVVLNKVDEE---EELLRE-LAEELGLEVLG-------V 216 (255)
T ss_pred CCCCCCCCEEEEEECCCH--HHHHHHHHHHHHHHHHCCCEEEEEEEECCCH---HHHHHH-HHHCCCCEEEE-------E
T ss_conf 563257877999957877--8888899999999871875499999503411---577776-53227974899-------7
Q ss_pred CCCCHHHHHHHHHC
Q ss_conf 00136889987735
Q gi|254780711|r 283 ENFFPDRIANRILG 296 (461)
Q Consensus 283 e~F~p~~~~~riLG 296 (461)
T Consensus 217 iP~d~~v~~~dl~G 230 (255)
T COG3640 217 IPYDPEVVEADLKG 230 (255)
T ss_pred CCCCHHHHHCCCCC
T ss_conf 16987887422568