HHsearch alignment for GI: 254780711 and conserved domain: PRK00089
>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=96.39 E-value=0.049 Score=35.75 Aligned_cols=121 Identities=17% Similarity=0.262 Sum_probs=65.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 84189962344333468899999999861489507820542210047799998510347422233210368999999999
Q gi|254780711|r 99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQS 178 (461)
Q Consensus 99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~ 178 (461)
T Consensus 7 ksG~VaivG~PNvGKSTL~N~l~-------~~k~siVS~---k~~--------TTR~~i--~gi~--------------- 51 (296)
T PRK00089 7 KSGFVAIVGRPNVGKSTLLNALV-------GQKISIVSP---KPQ--------TTRHRI--RGIV--------------- 51 (296)
T ss_pred CEEEEEEECCCCCCHHHHHHHHH-------CCCEEEECC---CCC--------CCCCCE--EEEE---------------
T ss_conf 37999999899988899999996-------896176149---599--------872838--9999---------------
Q ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHHHC-CCCCCCCCCCHHCCH--HHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 97415886998334422211246899999-98513-851100031011122--568888988763584407764115766
Q gi|254780711|r 179 ARDGGYDAVILDTAGRNHINDSLMQEISE-IKSLT-NPHEILLVADALTGQ--DAVHLARNFDKIVDLTGIILTRMDGDG 254 (461)
Q Consensus 179 a~~~~~D~iiiDTaGR~~~d~~lm~El~~-i~~~~-~p~e~~lV~da~~Gq--~a~~~a~~F~~~~~i~giIlTKlD~~a 254 (461)
T Consensus 52 -~~~~~q~i~iDTpGi~~~~~~l~~~~~~~~~~ai~~aDlil~viD~~~~~~~~d~~i~~~l~~~~kp~ilviNKiDlv~ 130 (296)
T PRK00089 52 -TEDDAQIIFVDTPGIHKPKRALNRAMNKAAWSSLKDVDLVLFVVDADEKIGPGDEFILEKLKKVKTPVILVLNKIDLVD 130 (296)
T ss_pred -EECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCC
T ss_conf -9799799999899866746778789999999999759999999857889898899999988874998899954788428
Q ss_pred C
Q ss_conf 3
Q gi|254780711|r 255 R 255 (461)
Q Consensus 255 k 255 (461)
T Consensus 131 k 131 (296)
T PRK00089 131 K 131 (296)
T ss_pred H
T ss_conf 9