HHsearch alignment for GI: 254780711 and conserved domain: PRK00279

Probab=95.95  E-value=0.043  Score=36.16  Aligned_cols=90  Identities=17%  Similarity=0.165  Sum_probs=48.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH------HHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8996234433346889999999986148950782054221004779------9998510347422233210368999999
Q gi|254780711|r  102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQ------LRYLGEQIQVDTLEVIPEQSPEKIAIRA  175 (461)
Q Consensus       102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQ------L~~~a~~~~v~~~~~~~~~dp~~i~~~a  175 (461)
T Consensus         2 ~iillG~PGsGKgTqa~~la~~~----~~-~~is~GdllR~~i~~~s~~g~~i~~~~~~-G~l----Vpd~i~~~lv~~~   71 (215)
T PRK00279          2 RLILLGPPGAGKGTQAKFIAEKY----GI-PHISTGDMLRAAIKAGTELGKEAKSYMDA-GEL----VPDEIVIGLVKER   71 (215)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHH----CC-EEECHHHHHHHHHHCCCHHHHHHHHHHHC-CCC----CCHHHHHHHHHHH
T ss_conf             79998999998799999999986----99-17868899999987399889999999977-987----7889999999999


Q ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHH
Q ss_conf             9999741588699833442221124689
Q gi|254780711|r  176 TQSARDGGYDAVILDTAGRNHINDSLMQ  203 (461)
Q Consensus       176 ~~~a~~~~~D~iiiDTaGR~~~d~~lm~  203 (461)
T Consensus        72 l~~~~~--~~G~IlDGfPRt~~Qa~~l~   97 (215)
T PRK00279         72 LAQPDC--ANGFLLDGFPRTIPQAEALD   97 (215)
T ss_pred             HHCCCC--CCEEEEECCCCCHHHHHHHH
T ss_conf             836565--57079868999879999999