HHsearch alignment for GI: 254780711 and conserved domain: PRK00741

>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=96.23  E-value=0.05  Score=35.69  Aligned_cols=152  Identities=18%  Similarity=0.224  Sum_probs=78.7

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC-CCCCCH-----HHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf             841899623443334688999999998614895078205-422100-----47799998510347422233210368999
Q gi|254780711|r   99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASL-DVHRPA-----AQEQLRYLGEQIQVDTLEVIPEQSPEKIA  172 (461)
Q Consensus        99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~-Dt~R~a-----A~eQL~~~a~~~~v~~~~~~~~~dp~~i~  172 (461)
T Consensus         9 ~~RniaIi~H~dAGKTTLtE~lL~~~Ga--I~~~G~V~~~~~~~~~~sD~~~~E~~R------giSI~ss----------   70 (526)
T PRK00741          9 KRRTFAIISHPDAGKTTLTEKLLLFGGA--IQEAGTVKGRKSGRHATSDWMEMEKQR------GISVTSS----------   70 (526)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCC--CCCCCEEECCCCCCCCCCCCCHHHHHC------CCEEECC----------
T ss_conf             1177999937898989999999974675--244846631467886467885889975------9648615----------


Q ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHH--HHCCCCCE-EEEE
Q ss_conf             99999997415886998334422211246899999985138511000310111225688889887--63584407-7641
Q gi|254780711|r  173 IRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFD--KIVDLTGI-ILTR  249 (461)
Q Consensus       173 ~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~--~~~~i~gi-IlTK  249 (461)
T Consensus        71 ---v~~~e~~~~~iNliDTPGh~----DF~~e~~raL~a~--D~Av~Vida~~GVe~qT-e~~w~~~~~~~iP~i~FINK  140 (526)
T PRK00741         71 ---VMQFPYRDCLINLLDTPGHE----DFSEDTYRTLTAV--DSALMVIDAAKGVEPQT-RKLMEVCRLRDTPIFTFINK  140 (526)
T ss_pred             ---EEEEEECCEEEEEEECCCCH----HHHHHHHHHHHHH--CEEEEEEECCCCCCHHH-HHHHHHHHHCCCCEEEEEEC
T ss_conf             ---17786789899999098946----7789999999873--75999997775523336-89999988639988999965


Q ss_pred             CCCC-CCCCHHH-HHHHHHCCCHH----HEECCCC
Q ss_conf             1576-6330367-77888478730----2615867
Q gi|254780711|r  250 MDGD-GRGGAAL-SMRTVTGKPIK----AIGTGEK  278 (461)
Q Consensus       250 lD~~-akgG~al-s~~~~~~~PI~----fig~GE~  278 (461)
T Consensus       141 mDR~~ad~~~~l~ei~~~lg~~~~p~~~Pig~g~~  175 (526)
T PRK00741        141 LDRDGREPLELLDEIEEVLGIACAPITWPIGMGKR  175 (526)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             67678987898877888747873688830367886