HHsearch alignment for GI: 254780711 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.44 E-value=0.018 Score=39.08 Aligned_cols=218 Identities=11% Similarity=0.104 Sum_probs=110.9
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC--EEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-HHHHHHH
Q ss_conf 58841899623443334688999999998614895--07820542210047799998510347422233210-3689999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKK--ILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQ-SPEKIAI 173 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~k--V~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~-dp~~i~~ 173 (461)
T Consensus 36 ~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C--------~~I~~g~~~DViEiDaAs~~gVddIR 107 (462)
T PRK06305 36 NRAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAIC--------KEISSGTSLDVIEIDGASHRGIEDIR 107 (462)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH--------HHHHCCCCCCEEEECCCCCCCHHHHH
T ss_conf 9976234303899859999999999996799998888988766888--------99863899986864355344668999
Q ss_pred HHHHHH----HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHH----HHHHHH--------
Q ss_conf 999999----7415886998334422211246899999985138511000310111225688----889887--------
Q gi|254780711|r 174 RATQSA----RDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVH----LARNFD-------- 237 (461)
Q Consensus 174 ~a~~~a----~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~----~a~~F~-------- 237 (461)
T Consensus 108 el~e~v~~~P~~~~yKVyIIDEvhmLs~~A--fNALLKtLEEP-P~~v~FILaTTe~~KIp~TIlSRCQrf~F~~i~~~~ 184 (462)
T PRK06305 108 QINETVLFTPSKSQYKIYIIDEVHMLTKEA--FNSLLKTLEEP-PQHVKFFLATTEIHKIPGTILSRCQKMHLKRIPEET 184 (462)
T ss_pred HHHHHHCCCCCCCCEEEEEEECHHHCCHHH--HHHHHHHHHCC-CCCEEEEEEECCHHHCCHHHHHHHHEEECCCCCHHH
T ss_conf 999771008867750599981521179999--99999986189-877499998188142854787654023325799999
Q ss_pred -----------HHCCCC----CEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHH
Q ss_conf -----------635844----07764115766330367778884787302615867232100136889987735862788
Q gi|254780711|r 238 -----------KIVDLT----GIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVS 302 (461)
Q Consensus 238 -----------~~~~i~----giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~ 302 (461)
T Consensus 185 I~~~L~~I~~~E~i~~e~~AL~lIA~~a~GsmR--DAlslLDQ~---i~~~--~~~it-------~~~V~~~lG~v~~~~ 250 (462)
T PRK06305 185 IIDKLALIAQQDGIETSREALLPIARAAQGSLR--DAESLYDYV---VGLF--PKSLS-------PDTVAKALGLLSQDS 250 (462)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH--HHHHHHHHH---HHHC--CCCCC-------HHHHHHHHCCCCHHH
T ss_conf 999999999983998599999999998589587--899999999---9847--99868-------999999868998899
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9998742112678--998886531046379999999999
Q gi|254780711|r 303 LVEKAARNLNEKQ--AALTAKKIAKGKFDLEDLAEQFRQ 339 (461)
Q Consensus 303 l~e~~~~~~d~~~--~~~l~~k~~~g~F~l~Df~~Ql~~ 339 (461)
T Consensus 251 l~~L~~ai~~~d~~~~l~~~~~i~~~G~d~~~~l~dL~~ 289 (462)
T PRK06305 251 LYTLAEAITTQNYAQALGPVTDALNSGVAPAHFLHDLTL 289 (462)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 999999998389999999999999849999999999999