HHsearch alignment for GI: 254780711 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.68 E-value=0.0051 Score=43.23 Aligned_cols=226 Identities=16% Similarity=0.221 Sum_probs=118.2
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHH
Q ss_conf 588418996234433346889999999986148--950782054221004779999851034742223321-03689999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKK--KKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE-QSPEKIAI 173 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~--~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~i~~ 173 (461)
T Consensus 40 ~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~-----c~~c~~i~~~~~~dv~EiDaas~~gv~~ir 114 (507)
T PRK06645 40 DRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEK-----CTNCISFNNHNHPDIIEIDAASKTSVDDIR 114 (507)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-----CHHHHHHHCCCCCCEEEEECCCCCCHHHHH
T ss_conf 996634774587997889999999999679998888998888888-----767899865899985996378888889999
Q ss_pred HHHHHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHH-----HHHHHHHHH-------
Q ss_conf 9999997----415886998334422211246899999985138511000310111225-----688889887-------
Q gi|254780711|r 174 RATQSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQD-----AVHLARNFD------- 237 (461)
Q Consensus 174 ~a~~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~-----a~~~a~~F~------- 237 (461)
T Consensus 115 ~l~~~~~~~p~~~~~kv~iidE~hmls~~--a~nallktlEep-p~~~~Fi~-atte~~kip~ti~srcq~f~~~~i~~~ 190 (507)
T PRK06645 115 RIIESAEYKPLQGKHKIFIIDEVHMLSKG--AFNALLKTLEEP-PPHIIFIF-ATTEVQKIPATIISRCQRYDLRRLSFE 190 (507)
T ss_pred HHHHHCCCCCCCCCEEEEEECCHHHCCHH--HHHHHHHHHHCC-CCCEEEEE-ECCCHHHCCHHHHHHCEEEEEECCCHH
T ss_conf 99863551787674358995214224899--999999974278-64438999-748536483788854327875459979
Q ss_pred ------------HHCCCC----CEEEEECCCCCCCCHHHHHHHHHCCCHHHE-ECCCCCCCCCCCCHHHHHHHHHCCCCH
Q ss_conf ------------635844----077641157663303677788847873026-158672321001368899877358627
Q gi|254780711|r 238 ------------KIVDLT----GIILTRMDGDGRGGAALSMRTVTGKPIKAI-GTGEKINDLENFFPDRIANRILGMGDV 300 (461)
Q Consensus 238 ------------~~~~i~----giIlTKlD~~akgG~als~~~~~~~PI~fi-g~GE~~~dle~F~p~~~~~riLGmgD~ 300 (461)
T Consensus 191 ~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RD--alslldq---ai~~~~~~~~~I~-------~~~V~~MLGl~Dr 258 (507)
T PRK06645 191 EIFKLLEYITKQENLKADIEALRIIAYKSEGSARD--AVSILDQ---AASMSAKSDNIIS-------PQVINQMLGLVDL 258 (507)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH--HHHHHHH---HHHHHCCCCCCCC-------HHHHHHHHCCCCH
T ss_conf 99999999999768777789999999855998678--9999999---9997548987026-------9999998389985
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHCCCCC----HHHHHHHHHHHHCC
Q ss_conf 88999874211267899--888653104637----99999999998511
Q gi|254780711|r 301 VSLVEKAARNLNEKQAA--LTAKKIAKGKFD----LEDLAEQFRQTQKI 343 (461)
Q Consensus 301 ~~l~e~~~~~~d~~~~~--~l~~k~~~g~F~----l~Df~~Ql~~i~km 343 (461)
T Consensus 259 s~lidL~e~Il~Gd~~kaL~~l~~iy~~G~Dp~~iL~DLLeiih~i~~i 307 (507)
T PRK06645 259 SVIIEFVEYIIERETEKAINLINKLYGSSVNLEIFIESVSDFIAYLNKV 307 (507)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6799999999829999999999999984999999999999999999999