HHsearch alignment for GI: 254780711 and conserved domain: PRK06645

>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.68  E-value=0.0051  Score=43.23  Aligned_cols=226  Identities=16%  Similarity=0.221  Sum_probs=118.2

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHH
Q ss_conf             588418996234433346889999999986148--950782054221004779999851034742223321-03689999
Q gi|254780711|r   97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKK--KKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPE-QSPEKIAI  173 (461)
Q Consensus        97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~--~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~-~dp~~i~~  173 (461)
T Consensus        40 ~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~-----c~~c~~i~~~~~~dv~EiDaas~~gv~~ir  114 (507)
T PRK06645         40 DRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEK-----CTNCISFNNHNHPDIIEIDAASKTSVDDIR  114 (507)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-----CHHHHHHHCCCCCCEEEEECCCCCCHHHHH
T ss_conf             996634774587997889999999999679998888998888888-----767899865899985996378888889999


Q ss_pred             HHHHHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHH-----HHHHHHHHH-------
Q ss_conf             9999997----415886998334422211246899999985138511000310111225-----688889887-------
Q gi|254780711|r  174 RATQSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQD-----AVHLARNFD-------  237 (461)
Q Consensus       174 ~a~~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~-----a~~~a~~F~-------  237 (461)
T Consensus       115 ~l~~~~~~~p~~~~~kv~iidE~hmls~~--a~nallktlEep-p~~~~Fi~-atte~~kip~ti~srcq~f~~~~i~~~  190 (507)
T PRK06645        115 RIIESAEYKPLQGKHKIFIIDEVHMLSKG--AFNALLKTLEEP-PPHIIFIF-ATTEVQKIPATIISRCQRYDLRRLSFE  190 (507)
T ss_pred             HHHHHCCCCCCCCCEEEEEECCHHHCCHH--HHHHHHHHHHCC-CCCEEEEE-ECCCHHHCCHHHHHHCEEEEEECCCHH
T ss_conf             99863551787674358995214224899--999999974278-64438999-748536483788854327875459979


Q ss_pred             ------------HHCCCC----CEEEEECCCCCCCCHHHHHHHHHCCCHHHE-ECCCCCCCCCCCCHHHHHHHHHCCCCH
Q ss_conf             ------------635844----077641157663303677788847873026-158672321001368899877358627
Q gi|254780711|r  238 ------------KIVDLT----GIILTRMDGDGRGGAALSMRTVTGKPIKAI-GTGEKINDLENFFPDRIANRILGMGDV  300 (461)
Q Consensus       238 ------------~~~~i~----giIlTKlD~~akgG~als~~~~~~~PI~fi-g~GE~~~dle~F~p~~~~~riLGmgD~  300 (461)
T Consensus       191 ~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RD--alslldq---ai~~~~~~~~~I~-------~~~V~~MLGl~Dr  258 (507)
T PRK06645        191 EIFKLLEYITKQENLKADIEALRIIAYKSEGSARD--AVSILDQ---AASMSAKSDNIIS-------PQVINQMLGLVDL  258 (507)
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH--HHHHHHH---HHHHHCCCCCCCC-------HHHHHHHHCCCCH
T ss_conf             99999999999768777789999999855998678--9999999---9997548987026-------9999998389985


Q ss_pred             HHHHHHHHHHHHHHHHH--HHHHHHHCCCCC----HHHHHHHHHHHHCC
Q ss_conf             88999874211267899--888653104637----99999999998511
Q gi|254780711|r  301 VSLVEKAARNLNEKQAA--LTAKKIAKGKFD----LEDLAEQFRQTQKI  343 (461)
Q Consensus       301 ~~l~e~~~~~~d~~~~~--~l~~k~~~g~F~----l~Df~~Ql~~i~km  343 (461)
T Consensus       259 s~lidL~e~Il~Gd~~kaL~~l~~iy~~G~Dp~~iL~DLLeiih~i~~i  307 (507)
T PRK06645        259 SVIIEFVEYIIERETEKAINLINKLYGSSVNLEIFIESVSDFIAYLNKV  307 (507)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             6799999999829999999999999984999999999999999999999