HHsearch alignment for GI: 254780711 and conserved domain: PRK06921
>PRK06921 hypothetical protein; Provisional.
Probab=96.31 E-value=0.1 Score=33.33 Aligned_cols=124 Identities=20% Similarity=0.299 Sum_probs=75.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r 100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA 179 (461)
Q Consensus 100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a 179 (461)
T Consensus 116 ~~~l~f~G~~G~GKThLa~aIa~~Ll~~~~~~Vly~~~----~~~~~~lk~~--------~~~-~--------~~~l~~~ 174 (265)
T PRK06921 116 KNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPF----VEGFGDLKDD--------FDL-L--------EAKLNRM 174 (265)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEH----HHHHHHHHHH--------HHH-H--------HHHHHHH
T ss_conf 66279972898988999999999999962971999887----9999999988--------888-9--------9999986
Q ss_pred HHCCCCEEEEECC-----CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 7415886998334-----42221124689999998513851100031011122568888988763584407764115766
Q gi|254780711|r 180 RDGGYDAVILDTA-----GRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDLTGIILTRMDGDG 254 (461)
Q Consensus 180 ~~~~~D~iiiDTa-----GR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~~i~giIlTKlD~~a 254 (461)
T Consensus 175 --~~~dlLIIDDLfk~~~G~e~~te~~~~~l------------------------------f------------------ 204 (265)
T PRK06921 175 --KKVEVLFIDDLFKPVNGKPRATEWQIEQT------------------------------Y------------------ 204 (265)
T ss_pred --HCCCEEEEECCCCCCCCCCCCCHHHHHHH------------------------------H------------------
T ss_conf --32999998221223479878988999999------------------------------9------------------
Q ss_pred CCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 330367778884787302615867232100136889987735862
Q gi|254780711|r 255 RGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGD 299 (461)
Q Consensus 255 kgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD 299 (461)
T Consensus 205 ---~iIN~Ry~~~kpt-IiSSNl~~~~L~~i-~e~i~SRi~emc~ 244 (265)
T PRK06921 205 ---SVVNYRYLNHKPI-LISSELTIDELLDI-DEALGSRIVEMCK 244 (265)
T ss_pred ---HHHHHHHHCCCCE-EEECCCCHHHHHHH-HHHHHHHHHHHCC
T ss_conf ---9999999769998-99868998999876-3798888999725