HHsearch alignment for GI: 254780711 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=96.13 E-value=0.16 Score=31.81 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=68.3
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT 176 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~ 176 (461)
T Consensus 36 ~~~~HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~------i~~g~hpDv~~i~p~~~~i~id~iR~l~ 109 (395)
T PRK07940 36 SGMTHAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRT------VLAGTHPDVRVVVPEGLSIGVDEVREIV 109 (395)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH------HHCCCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 8766037636899878899999999996699999999987878999------8768998718982687768899999999
Q ss_pred HHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCC
Q ss_conf 9997----41588699833442221124689999998513851100031011122568888988763584
Q gi|254780711|r 177 QSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIVDL 242 (461)
Q Consensus 177 ~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~~i 242 (461)
T Consensus 110 ~~~~~~p~~~~~kv~ii~~a~~m~~~a--~NalLKtLEE-Pp~~~~fiL~t~~~~~llpTI~SRcq~~~f 176 (395)
T PRK07940 110 QIAARRPTTGRWRIVVIEDADRLTERA--ANALLKAVEE-PPPRTVWLLCAPSVEDVLPTIRSRCRHVAL 176 (395)
T ss_pred HHHHHCCCCCCCEEEEEECHHHHCHHH--HHHHHHHHCC-CCCCEEEEEEECCHHHHHHHHHHHHEECCC
T ss_conf 998527303795599980778748999--9999985217-888869998739978744688744000237