HHsearch alignment for GI: 254780711 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.44 E-value=0.11 Score=32.96 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=92.1
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC----CCCCHHHHHHH
Q ss_conf 88418996234433346889999999986148950782054221004779999851034742223----32103689999
Q gi|254780711|r 98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEV----IPEQSPEKIAI 173 (461)
Q Consensus 98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~----~~~~dp~~i~~ 173 (461)
T Consensus 36 r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~--~~~pcg~-----c~~c~~i~~g~~~d~~eidaas~~~vd~~rel~ 108 (643)
T PRK07994 36 RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI--TATPCGV-----CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLL 108 (643)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC--CCCCCCC-----CHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 866348745899888889999999996799999--9997876-----776898865898875886367778889999999
Q ss_pred HHHHHHH-HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHH-----HHHHHHHHH----------
Q ss_conf 9999997-415886998334422211246899999985138511000310111225-----688889887----------
Q gi|254780711|r 174 RATQSAR-DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQD-----AVHLARNFD---------- 237 (461)
Q Consensus 174 ~a~~~a~-~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~-----a~~~a~~F~---------- 237 (461)
T Consensus 109 ~~~~y~p~~~r~kvyiidEvhmls~~a--fnalLKtlEe-Pp~hv~fil-aTT~~~k~p~TilSRC~~f~~~~~~~~~i~ 184 (643)
T PRK07994 109 DNVQYAPARGRFKVYLIDEVHMLSRHS--FNALLKTLEE-PPAHVKFLL-ATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 (643)
T ss_pred HHCCCCCCCCCEEEEEEECHHHCCHHH--HHHHHHHHCC-CCHHCEEEE-ECCCHHHCCHHHHHHHHHEECCCCCHHHHH
T ss_conf 844668877853699972210158999--9999986237-861008998-607745484789977765001669999999
Q ss_pred ---------HHCCCCCEEEEECCCCCCCC--HHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
Q ss_conf ---------63584407764115766330--3677788847873026158672321001368899877358627889998
Q gi|254780711|r 238 ---------KIVDLTGIILTRMDGDGRGG--AALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLVEK 306 (461)
Q Consensus 238 ---------~~~~i~giIlTKlD~~akgG--~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l~e~ 306 (461)
T Consensus 185 ~~l~~i~~~e~i~~~~~al~~ia~~a~gs~rdalsl~dq---~i~~-~~~~-~~-------~~~v~~mlg~~d~~~~~~l 252 (643)
T PRK07994 185 HQLEHILNEEHIAHEPRALQLLARAADGSLRDALSLTDQ---AIAS-GDGQ-VS-------TQAVSAMLGTLDDDQALSL 252 (643)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH---HHHH-CCCC-CC-------HHHHHHHHCCCCHHHHHHH
T ss_conf 999999997599878899999999747865668889999---9986-5897-47-------9999998589987899999
Q ss_pred HHHHHHHHHH--HHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 7421126789--98886531046379999999999
Q gi|254780711|r 307 AARNLNEKQA--ALTAKKIAKGKFDLEDLAEQFRQ 339 (461)
Q Consensus 307 ~~~~~d~~~~--~~l~~k~~~g~F~l~Df~~Ql~~ 339 (461)
T Consensus 253 l~al~~~d~~~~~~~~~~~~~~~~~~~~~l~~l~~ 287 (643)
T PRK07994 253 VEALVEANGERVMALINEAAARGIEWEALLVEMLS 287 (643)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999569999999999999868899999999999