HHsearch alignment for GI: 254780711 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=95.92 E-value=0.16 Score=31.87 Aligned_cols=136 Identities=10% Similarity=0.050 Sum_probs=60.3
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT 176 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~ 176 (461)
T Consensus 25 ~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~--~~~~~Cg~C~~C---~~~~~~~HPD~~~i~p~~~~i~idqiR~L~ 99 (329)
T PRK08058 25 NRLAHAYLFEGAKGTGKKATALWLAKSLFCLER--NGVEPCGTCTNC---KRIESGNHPDVHLVAPDGQSIKKDQIRYLK 99 (329)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCHHH---HHHHCCCCCCEEEECCCCCCCCHHHHHHHH
T ss_conf 996615655789998899999999999739999--999988788899---998769999767745661407799999999
Q ss_pred HHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHC
Q ss_conf 9997----415886998334422211246899999985138511000310111225688889887635
Q gi|254780711|r 177 QSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIV 240 (461)
Q Consensus 177 ~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~ 240 (461)
T Consensus 100 ~~~~~~p~~g~~KV~II~~Ae~m~~~Aa--NALLKtLEEP-p~~t~fIL~t~~~~~lLpTI~SRCq~i 164 (329)
T PRK08058 100 EEFSKSGVESNKKVYIIEHADKMTASAA--NSLLKFLEEP-SGDTTAILLTENKHQILPTILSRCQVV 164 (329)
T ss_pred HHHCCCCCCCCCEEEEEECHHHHCHHHH--HHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHCCEEE
T ss_conf 9964387578867999734776299999--9999986468-978679987299666436886314256