HHsearch alignment for GI: 254780711 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=95.92  E-value=0.16  Score=31.87  Aligned_cols=136  Identities=10%  Similarity=0.050  Sum_probs=60.3

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             58841899623443334688999999998614895078205422100477999985103474222332103689999999
Q gi|254780711|r   97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRAT  176 (461)
Q Consensus        97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~  176 (461)
T Consensus        25 ~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~--~~~~~Cg~C~~C---~~~~~~~HPD~~~i~p~~~~i~idqiR~L~   99 (329)
T PRK08058         25 NRLAHAYLFEGAKGTGKKATALWLAKSLFCLER--NGVEPCGTCTNC---KRIESGNHPDVHLVAPDGQSIKKDQIRYLK   99 (329)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCHHH---HHHHCCCCCCEEEECCCCCCCCHHHHHHHH
T ss_conf             996615655789998899999999999739999--999988788899---998769999767745661407799999999


Q ss_pred             HHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHC
Q ss_conf             9997----415886998334422211246899999985138511000310111225688889887635
Q gi|254780711|r  177 QSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIV  240 (461)
Q Consensus       177 ~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~~~  240 (461)
T Consensus       100 ~~~~~~p~~g~~KV~II~~Ae~m~~~Aa--NALLKtLEEP-p~~t~fIL~t~~~~~lLpTI~SRCq~i  164 (329)
T PRK08058        100 EEFSKSGVESNKKVYIIEHADKMTASAA--NSLLKFLEEP-SGDTTAILLTENKHQILPTILSRCQVV  164 (329)
T ss_pred             HHHCCCCCCCCCEEEEEECHHHHCHHHH--HHHHHHHHCC-CCCCEEEEEECCHHHHHHHHHHCCEEE
T ss_conf             9964387578867999734776299999--9999986468-978679987299666436886314256