HHsearch alignment for GI: 254780711 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.00 E-value=0.0098 Score=41.07 Aligned_cols=194 Identities=14% Similarity=0.137 Sum_probs=92.7
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC-HHHHHHHHH
Q ss_conf 5884189962344333468899999999861489507820542210047799998510347422233210-368999999
Q gi|254780711|r 97 APSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQ-SPEKIAIRA 175 (461)
Q Consensus 97 ~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~-dp~~i~~~a 175 (461)
T Consensus 33 ~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~--~~~PCg~C~-----sC~~i~~g~hpDViEiDaasn~gID~IReL 105 (523)
T PRK08451 33 NRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGP--SSTPCGTCA-----QCQAALEGRHIDIIEMDAASNRGIDDIRNL 105 (523)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC--CCCCCCCCH-----HHHHHHCCCCCCEEEECCCCCCCHHHHHHH
T ss_conf 9967158757899868899999999997599999--989888788-----899986489998551055333689999999
Q ss_pred HHHHH----HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHH----HHHHHHHH----------
Q ss_conf 99997----4158869983344222112468999999851385110003101112256----88889887----------
Q gi|254780711|r 176 TQSAR----DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDA----VHLARNFD---------- 237 (461)
Q Consensus 176 ~~~a~----~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a----~~~a~~F~---------- 237 (461)
T Consensus 106 ie~~~~~P~~gryKV~IIDEah~Lt~~A--~NALLKTLEEP-P~~vvFILaTTep~KLp~TIlSRCQ~f~Fk~I~~~~I~ 182 (523)
T PRK08451 106 IEQTKYKPSMARFKIFIIDEVHMLTKEA--FNALLKTLEEP-PSYVKFILATTDPLKLPATILSRTQHFRFKQIPQNSII 182 (523)
T ss_pred HHHHCCCCCCCCEEEEEEECCCCCCHHH--HHHHHHHCCCC-CCCCEEEEECCCHHHCHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 9972358867972799982603048999--99999970389-87837999759947684888742031103379999999
Q ss_pred ---------HHCCCC----CEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
Q ss_conf ---------635844----0776411576633036777888478730261586723210013688998773586278899
Q gi|254780711|r 238 ---------KIVDLT----GIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDVVSLV 304 (461)
Q Consensus 238 ---------~~~~i~----giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dle~F~p~~~~~riLGmgD~~~l~ 304 (461)
T Consensus 183 ~~L~~I~~~E~i~~e~~AL~~IA~~a~GslR--DalslLdQ---~i~~~-~~-~i~-------~~~v~~~lG~~d~~~~~ 248 (523)
T PRK08451 183 SHLKTILNKEGVSYEPEALEILARSGSGSLR--DTLTLLDQ---AIIFC-KN-AIT-------ESKVADMLGLLDPSKIE 248 (523)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH--HHHHHHHH---HHHHC-CC-CCC-------HHHHHHHHCCCCHHHHH
T ss_conf 9999999983998799999999997789486--89879999---99847-99-877-------99999985888999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9874211267
Q gi|254780711|r 305 EKAARNLNEK 314 (461)
Q Consensus 305 e~~~~~~d~~ 314 (461)
T Consensus 249 ~l~~~i~~~d 258 (523)
T PRK08451 249 DFFQAILNKD 258 (523)
T ss_pred HHHHHHHHCC
T ss_conf 9999999458