HHsearch alignment for GI: 254780711 and conserved domain: PRK08939

Probab=96.44  E-value=0.022  Score=38.40  Aligned_cols=86  Identities=19%  Similarity=0.176  Sum_probs=61.4

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r  100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA  179 (461)
Q Consensus       100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a  179 (461)
T Consensus       157 ~kGlyl~G~~G~GKTyL~~aian~La~-~g~~v~~v~~p~~----~~~lK~s--------~~d~s~-------~~~i~~~  216 (306)
T PRK08939        157 VKGLYLYGDFGVGKTYLLAAIANELAK-KGVSSTLVHFPEF----IRELKNA--------ISDGSV-------KEKIDAV  216 (306)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEEHHHH----HHHHHHH--------HCCCCH-------HHHHHHH
T ss_conf             877889899999899999999999998-6992999875999----9999998--------648988-------9999998


Q ss_pred             HHCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf             7415886998334422211246899999
Q gi|254780711|r  180 RDGGYDAVILDTAGRNHINDSLMQEISE  207 (461)
Q Consensus       180 ~~~~~D~iiiDTaGR~~~d~~lm~El~~  207 (461)
T Consensus       217 k--~~~vLiLDDiGaE~~t~W~rd~vl~  242 (306)
T PRK08939        217 K--EAPVLMLDDIGAEQMSSWVRDEVLG  242 (306)
T ss_pred             H--CCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf             4--4998998444654267778998999