HHsearch alignment for GI: 254780711 and conserved domain: PRK10787
>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=96.48 E-value=0.11 Score=33.15 Aligned_cols=108 Identities=18% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC----------CCC---CCHHHHHHHHHHHCCC-------C
Q ss_conf 8841899623443334688999999998614895078205----------422---1004779999851034-------7
Q gi|254780711|r 98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASL----------DVH---RPAAQEQLRYLGEQIQ-------V 157 (461)
Q Consensus 98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~----------Dt~---R~aA~eQL~~~a~~~~-------v 157 (461)
T Consensus 347 ~kg~IlclvGpPGvGKTSl~~sIA~al~-r~f~rislGGv~DeaeirGHrrTYvgampGrii~~l~~a~~~nPv~llDEi 425 (784)
T PRK10787 347 IKGPILCLVGPPGVGKTSLGQSIAKATG-RKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEI 425 (784)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHH
T ss_conf 7787799646998772469999999858-986998068878888825643343443683899999974898856650035
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHC---------CCC---EEEEECCCCCCCHHHHHHHHH
Q ss_conf 4222332103689999999999741---------588---699833442221124689999
Q gi|254780711|r 158 DTLEVIPEQSPEKIAIRATQSARDG---------GYD---AVILDTAGRNHINDSLMQEIS 206 (461)
Q Consensus 158 ~~~~~~~~~dp~~i~~~a~~~a~~~---------~~D---~iiiDTaGR~~~d~~lm~El~ 206 (461)
T Consensus 426 DK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~~~ip~pLlDRmE 486 (784)
T PRK10787 426 DKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRME 486 (784)
T ss_pred HHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCCCCCCHHHHHHEE
T ss_conf 5522455899889999845976556400032204645222589973276778767763121