HHsearch alignment for GI: 254780711 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=96.48  E-value=0.11  Score=33.15  Aligned_cols=108  Identities=18%  Similarity=0.212  Sum_probs=57.1

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC----------CCC---CCHHHHHHHHHHHCCC-------C
Q ss_conf             8841899623443334688999999998614895078205----------422---1004779999851034-------7
Q gi|254780711|r   98 PSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASL----------DVH---RPAAQEQLRYLGEQIQ-------V  157 (461)
Q Consensus        98 ~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~----------Dt~---R~aA~eQL~~~a~~~~-------v  157 (461)
T Consensus       347 ~kg~IlclvGpPGvGKTSl~~sIA~al~-r~f~rislGGv~DeaeirGHrrTYvgampGrii~~l~~a~~~nPv~llDEi  425 (784)
T PRK10787        347 IKGPILCLVGPPGVGKTSLGQSIAKATG-RKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEI  425 (784)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHH
T ss_conf             7787799646998772469999999858-986998068878888825643343443683899999974898856650035


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHC---------CCC---EEEEECCCCCCCHHHHHHHHH
Q ss_conf             4222332103689999999999741---------588---699833442221124689999
Q gi|254780711|r  158 DTLEVIPEQSPEKIAIRATQSARDG---------GYD---AVILDTAGRNHINDSLMQEIS  206 (461)
Q Consensus       158 ~~~~~~~~~dp~~i~~~a~~~a~~~---------~~D---~iiiDTaGR~~~d~~lm~El~  206 (461)
T Consensus       426 DK~~~~~~Gdp~salLEvLDpeQN~~F~Dhyl~~~~DlS~v~Fi~TaN~~~ip~pLlDRmE  486 (784)
T PRK10787        426 DKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRME  486 (784)
T ss_pred             HHHCCCCCCCHHHHHHHHCCHHHCCCCCCCEEECCCCHHHEEEEEECCCCCCCHHHHHHEE
T ss_conf             5522455899889999845976556400032204645222589973276778767763121