HHsearch alignment for GI: 254780711 and conserved domain: PRK13232
>PRK13232 nifH nitrogenase reductase; Reviewed.
Probab=97.78 E-value=0.00017 Score=54.46 Aligned_cols=146 Identities=26% Similarity=0.263 Sum_probs=77.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH------------HHHHHHHHHC------------CCC
Q ss_conf 8996234433346889999999986148950782054221004------------7799998510------------347
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAA------------QEQLRYLGEQ------------IQV 157 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA------------~eQL~~~a~~------------~~v 157 (461)
T Consensus 3 ~iaiyGKGGVGKSTTt~NLaAALA~-~GkkVL~IgcDPk~dsT~~l~gg~~~~tvld~l~~~~~~~~~l~~v~~~g~~gv 81 (273)
T PRK13232 3 QIAIYGKGGIGKSTTTQNLTAALST-MGNKILLVGCDPKADSTRMLLGGLNQKTVLDTLRSEGDEGVDLDVVMQPGFGDI 81 (273)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHEEECCCCCE
T ss_conf 7999799866588789999999997-799699989788442777885899888799999861856563666154288973
Q ss_pred CCCCCCC---C---CHHHHHH-HHHHHHH--HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC--C
Q ss_conf 4222332---1---0368999-9999999--7415886998334422211246899999985138511000310111--2
Q gi|254780711|r 158 DTLEVIP---E---QSPEKIA-IRATQSA--RDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT--G 226 (461)
Q Consensus 158 ~~~~~~~---~---~dp~~i~-~~a~~~a--~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~--G 226 (461)
T Consensus 82 ~cve~ggp~~g~gcagrgii~~~~lle~l~~~~~~~Dyvl~Dvlgdvvcggfa~-P~----~~~~A~evlIVts~E~~sl 156 (273)
T PRK13232 82 KCVESGGPEPGVGCAGRGIITSIGLLENLGAYTDDLDYVFYDVLGDVVCGGFAM-PI----REGKAKEIYIVASGELMAI 156 (273)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC-CC----CCCCCCEEEEEECCCHHHH
T ss_conf 898689987676545304788888999708321479889994147332365314-42----0165768999807608889
Q ss_pred HHHHHH---HHHHHH-HCCCCCEEEEECCCC
Q ss_conf 256888---898876-358440776411576
Q gi|254780711|r 227 QDAVHL---ARNFDK-IVDLTGIILTRMDGD 253 (461)
Q Consensus 227 q~a~~~---a~~F~~-~~~i~giIlTKlD~~ 253 (461)
T Consensus 157 yaannI~k~i~~~~~~~~rl~GiI~n~r~~~ 187 (273)
T PRK13232 157 YAANNICKGLAKFAKGGARLGGIICNSRNVD 187 (273)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 9999999999999621885014885055776