HHsearch alignment for GI: 254780711 and conserved domain: PRK13232

>PRK13232 nifH nitrogenase reductase; Reviewed.
Probab=97.78  E-value=0.00017  Score=54.46  Aligned_cols=146  Identities=26%  Similarity=0.263  Sum_probs=77.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH------------HHHHHHHHHC------------CCC
Q ss_conf             8996234433346889999999986148950782054221004------------7799998510------------347
Q gi|254780711|r  102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAA------------QEQLRYLGEQ------------IQV  157 (461)
Q Consensus       102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA------------~eQL~~~a~~------------~~v  157 (461)
T Consensus         3 ~iaiyGKGGVGKSTTt~NLaAALA~-~GkkVL~IgcDPk~dsT~~l~gg~~~~tvld~l~~~~~~~~~l~~v~~~g~~gv   81 (273)
T PRK13232          3 QIAIYGKGGIGKSTTTQNLTAALST-MGNKILLVGCDPKADSTRMLLGGLNQKTVLDTLRSEGDEGVDLDVVMQPGFGDI   81 (273)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHEEECCCCCE
T ss_conf             7999799866588789999999997-799699989788442777885899888799999861856563666154288973


Q ss_pred             CCCCCCC---C---CHHHHHH-HHHHHHH--HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC--C
Q ss_conf             4222332---1---0368999-9999999--7415886998334422211246899999985138511000310111--2
Q gi|254780711|r  158 DTLEVIP---E---QSPEKIA-IRATQSA--RDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT--G  226 (461)
Q Consensus       158 ~~~~~~~---~---~dp~~i~-~~a~~~a--~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~--G  226 (461)
T Consensus        82 ~cve~ggp~~g~gcagrgii~~~~lle~l~~~~~~~Dyvl~Dvlgdvvcggfa~-P~----~~~~A~evlIVts~E~~sl  156 (273)
T PRK13232         82 KCVESGGPEPGVGCAGRGIITSIGLLENLGAYTDDLDYVFYDVLGDVVCGGFAM-PI----REGKAKEIYIVASGELMAI  156 (273)
T ss_pred             EEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC-CC----CCCCCCEEEEEECCCHHHH
T ss_conf             898689987676545304788888999708321479889994147332365314-42----0165768999807608889


Q ss_pred             HHHHHH---HHHHHH-HCCCCCEEEEECCCC
Q ss_conf             256888---898876-358440776411576
Q gi|254780711|r  227 QDAVHL---ARNFDK-IVDLTGIILTRMDGD  253 (461)
Q Consensus       227 q~a~~~---a~~F~~-~~~i~giIlTKlD~~  253 (461)
T Consensus       157 yaannI~k~i~~~~~~~~rl~GiI~n~r~~~  187 (273)
T PRK13232        157 YAANNICKGLAKFAKGGARLGGIICNSRNVD  187 (273)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             9999999999999621885014885055776