HHsearch alignment for GI: 254780711 and conserved domain: PRK13537
>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=94.97 E-value=0.017 Score=39.35 Aligned_cols=45 Identities=22% Similarity=0.192 Sum_probs=30.8
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 0002588418996234433346889999999986148950782054
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLD 138 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~D 138 (461)
T Consensus 24 vs~~V~~Gei~gllGpNGAGKTTli~~l~Gl~~p~sG-~v~i~G~~ 68 (304)
T PRK13537 24 LSFHVQPGECFGLLGPNGAGKTTTLKMLLGLTHPDAG-TISLCGEP 68 (304)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEE
T ss_conf 1778869959999999897299999999779568976-89999998