HHsearch alignment for GI: 254780711 and conserved domain: PRK13636
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.61 E-value=0.091 Score=33.71 Aligned_cols=218 Identities=16% Similarity=0.145 Sum_probs=105.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC--CCCHHHHHHHHHHHCCCCCC-------CCCC------
Q ss_conf 84189962344333468899999999861489507820542--21004779999851034742-------2233------
Q gi|254780711|r 99 SPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDV--HRPAAQEQLRYLGEQIQVDT-------LEVI------ 163 (461)
Q Consensus 99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt--~R~aA~eQL~~~a~~~~v~~-------~~~~------ 163 (461)
T Consensus 31 ~Ge~~aiiG~NGaGKSTLl~~i~Gll~p~~G~-I~~~G~~i~~~~~~----~~~~r~~ig~vfQ~p~~~l~~~tV~e~v~ 105 (285)
T PRK13636 31 KGEVTAILGGNGAGKSTLFQNLNGILKPSSGR-ILFDGKPIDYSRKG----LMKLRESVGMVFQDPDNQLFSASVYQDVS 105 (285)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE-EEECCEECCCCHHH----HHHHHHHEEEEEECCCCCCCCCCHHHHHH
T ss_conf 99899999999980999999996598888608-99999998744344----99998740699707642447574999999
Q ss_pred -----CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH-HHHHHHHHHHHHHCCCCCCCCCCC-HHCCHHHHHHH---
Q ss_conf -----21036899999999997415886998334422211-246899999985138511000310-11122568888---
Q gi|254780711|r 164 -----PEQSPEKIAIRATQSARDGGYDAVILDTAGRNHIN-DSLMQEISEIKSLTNPHEILLVAD-ALTGQDAVHLA--- 233 (461)
Q Consensus 164 -----~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d-~~lm~El~~i~~~~~p~e~~lV~d-a~~Gq~a~~~a--- 233 (461)
T Consensus 106 ~g~~~~g~~~~e~-~~rv~~~L~~-~gl--~~~~~~~~~~LSGGqkqRvaIA~aLa~~P~iLlLDEPTagLDp~~~~~i~ 181 (285)
T PRK13636 106 FGAVNLKLPEDEV-RKRVDNALKR-TGI--EHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIM 181 (285)
T ss_pred HHHHHCCCCHHHH-HHHHHHHHHH-CCC--HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf 9999859999999-9999999987-598--86652880019999999999999997499899997875559999999999
Q ss_pred ---HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCC---CCC-CHHHHHHHHHCCCCHHHHHHH
Q ss_conf ---9887635844077641157663303677788847873026158672321---001-368899877358627889998
Q gi|254780711|r 234 ---RNFDKIVDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDL---ENF-FPDRIANRILGMGDVVSLVEK 306 (461)
Q Consensus 234 ---~~F~~~~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dl---e~F-~p~~~~~riLGmgD~~~l~e~ 306 (461)
T Consensus 182 ~ll~~l~~e~g~TiilvtH-d--------~~~v~~~aDrvivl~~G~iv~~G~p~evf~~~~~l~~~~l~~P~~~~l~~~ 252 (285)
T PRK13636 182 KLLVEMQKELGLTIIIATH-D--------IDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEMLRKVNLRLPRIGHLMEI 252 (285)
T ss_pred HHHHHHHHHCCCEEEEECC-C--------HHHHHHHCCEEEEEECCEEEEECCHHHHHCCHHHHHHCCCCCCCHHHHHHH
T ss_conf 9999999844989999948-8--------999999699999998998999869999966999999779999969999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 742112678998886531046379999999999851
Q gi|254780711|r 307 AARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQK 342 (461)
Q Consensus 307 ~~~~~d~~~~~~l~~k~~~g~F~l~Df~~Ql~~i~k 342 (461)
T Consensus 253 L~~~~--------g~~~~~~~lt~~e~~~~l~~~~~ 280 (285)
T PRK13636 253 LKEKD--------GFVFDELDLTISQARKTLNSWKN 280 (285)
T ss_pred HHHHC--------CCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98830--------99989997779999999999998