HHsearch alignment for GI: 254780711 and conserved domain: PRK13641
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=95.77 E-value=0.014 Score=39.99 Aligned_cols=229 Identities=17% Similarity=0.240 Sum_probs=105.1
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 00025884189962344333468899999999861489507820542210047799998510347422233210368999
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIA 172 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~ 172 (461)
T Consensus 28 l~I~~G--e~~~iiG~nGsGKSTLl~~l~Gll~P~sG-~V~i~G~~i~~~~~~~~~~~~r~~vg~vf-Q~p~~ql~~~tV 103 (286)
T PRK13641 28 FELEDG--SFVALIGHTGSGKSTLMQHFNALLKPSSG-KITIAGYHITPETSNKNLKDLRKKVGLVF-QFPEAQLFENTV 103 (286)
T ss_pred EEECCC--CEEEEECCCCCHHHHHHHHHHCCCCCCCE-EEEECCEECCCCCCHHHHHHHHHHEEEEE-ECCCCCCCCCHH
T ss_conf 798699--99999999983999999999659898854-99999899976665557999985154897-665101261129
Q ss_pred HHHHHHHHHC-C-------------CC-EEEE-ECCCCCCCHHH-HHHHHHHHHHHCCCCCCCCCCC-HHCCHHHHH---
Q ss_conf 9999999741-5-------------88-6998-33442221124-6899999985138511000310-111225688---
Q gi|254780711|r 173 IRATQSARDG-G-------------YD-AVIL-DTAGRNHINDS-LMQEISEIKSLTNPHEILLVAD-ALTGQDAVH--- 231 (461)
Q Consensus 173 ~~a~~~a~~~-~-------------~D-~iii-DTaGR~~~d~~-lm~El~~i~~~~~p~e~~lV~d-a~~Gq~a~~--- 231 (461)
T Consensus 104 ~eev~~g~~~~g~~~~e~~~~~~~~l~~vgl~~~~~~~~p~~LSGGqkqRvaiA~aLa~~P~iLlLDEPTsgLDp~~~~~ 183 (286)
T PRK13641 104 LKDVEFGPKNFGFSEQEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKE 183 (286)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
T ss_conf 99999999986999899999999999976996455542913299999999999999974999999739734389999999
Q ss_pred ---HHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEECCCCCCCC---CCC-CHHHHHHHHHCCCCHHHHH
Q ss_conf ---889887635844077641157663303677788847873026158672321---001-3688998773586278899
Q gi|254780711|r 232 ---LARNFDKIVDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDL---ENF-FPDRIANRILGMGDVVSLV 304 (461)
Q Consensus 232 ---~a~~F~~~~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~GE~~~dl---e~F-~p~~~~~riLGmgD~~~l~ 304 (461)
T Consensus 184 i~~ll~~l~~~-G~Tii~vtH-d--------~~~v~~~adrv~vm~~G~iv~~G~p~evf~~~~~l~~~~l~~P~~~~~~ 253 (286)
T PRK13641 184 MMQIFKDYQKA-GHTVILVTH-N--------MDDVAEYADDVLVLEHGKLIKHASPKEIFSDSEWLKKHYLDEPATSRFA 253 (286)
T ss_pred HHHHHHHHHHC-CCEEEEECC-C--------HHHHHHHCCEEEEEECCEEEEECCHHHHHCCHHHHHHCCCCCCHHHHHH
T ss_conf 99999999963-999999915-9--------9999997999999989999997799999659999997799999399999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
Q ss_conf 9874211267899888653104637999999999985114
Q gi|254780711|r 305 EKAARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQKIG 344 (461)
Q Consensus 305 e~~~~~~d~~~~~~l~~k~~~g~F~l~Df~~Ql~~i~kmG 344 (461)
T Consensus 254 ~~L~~~---------g~~~~~~~lt~~e~~~~l~~~l~~~ 284 (286)
T PRK13641 254 SKLEKG---------GFKFSENPLTIDELVDGIKNNLKGG 284 (286)
T ss_pred HHHHHC---------CCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 999975---------9999999879999999999996388