HHsearch alignment for GI: 254780711 and conserved domain: TIGR00313

>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=96.36  E-value=0.056  Score=35.33  Aligned_cols=164  Identities=20%  Similarity=0.304  Sum_probs=107.6

Q ss_pred             EEEECCC-CCCHHHHHHHHHHHHHHHCCCCEE-----------EECCCCCCCHHHHHHHHHHHCCC--------------
Q ss_conf             9962344-333468899999999861489507-----------82054221004779999851034--------------
Q gi|254780711|r  103 IMLVGLQ-GSGKTTTTAKIAYHLKTLKKKKIL-----------MASLDVHRPAAQEQLRYLGEQIQ--------------  156 (461)
Q Consensus       103 IllvGl~-GsGKTTT~aKLA~~~~~~~~~kV~-----------lv~~Dt~R~aA~eQL~~~a~~~~--------------  156 (461)
T Consensus         1 iMV~GTsS~AGKs~l~AaLCRiL~r-rGy~VAPFKsQNMSLNSfvt~~~~EiA~AQ~~QA~AAGieP~~~mNPvLLKPkg   79 (502)
T TIGR00313         1 IMVVGTSSSAGKSLLTAALCRILAR-RGYRVAPFKSQNMSLNSFVTAEGGEIAIAQALQALAAGIEPSVHMNPVLLKPKG   79 (502)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             9542011540289999999999852-788127850110101333113787551376899986387886234871016788


Q ss_pred             ---------------CCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH-HH--HHHHHHCCCCC
Q ss_conf             ---------------742--22332103689999999999741588699833442221124689-99--99985138511
Q gi|254780711|r  157 ---------------VDT--LEVIPEQSPEKIAIRATQSARDGGYDAVILDTAGRNHINDSLMQ-EI--SEIKSLTNPHE  216 (461)
Q Consensus       157 ---------------v~~--~~~~~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~-El--~~i~~~~~p~e  216 (461)
T Consensus        80 df~SQviv~G~a~g~~~~~~Y~~~~~d~~~~~i~eSle~L-~~~Yd~vv~EGAG-S~AEINL~~rDLaN~~iA~~~~A~-  156 (502)
T TIGR00313        80 DFTSQVIVHGRAVGDMNAQEYYKNKVDFLLKAIKESLEIL-AEEYDLVVIEGAG-SPAEINLKERDLANMRIAELADAD-  156 (502)
T ss_pred             CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECCC-CCCCCCCCCCCCHHHHHHHHCCCC-
T ss_conf             8466789841124667615677799999999999999875-2028889982688-710005331572247898643976-


Q ss_pred             CCCCCCHHCCHHHHHHHHHHHHHC------CCCCEEEEECCCCCCC--CHHHHHHHHHCCCHH
Q ss_conf             000310111225688889887635------8440776411576633--036777888478730
Q gi|254780711|r  217 ILLVADALTGQDAVHLARNFDKIV------DLTGIILTRMDGDGRG--GAALSMRTVTGKPIK  271 (461)
Q Consensus       217 ~~lV~da~~Gq~a~~~a~~F~~~~------~i~giIlTKlD~~akg--G~als~~~~~~~PI~  271 (461)
T Consensus       157 ~iLvADIDRGGVFAsi~GTl~-LL~~~~r~liKG~vINkfRG~~~vL~~GI~~lEelTGiPVL  218 (502)
T TIGR00313       157 VILVADIDRGGVFASIYGTLK-LLPEEERKLIKGIVINKFRGNVDVLESGIEKLEELTGIPVL  218 (502)
T ss_pred             EEEEEECCCCCCHHHHHHHHH-HCCCCCCCEECEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             799975077743243374666-18834575003068835468724434456899885484234