HHsearch alignment for GI: 254780711 and conserved domain: TIGR00313
>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=96.36 E-value=0.056 Score=35.33 Aligned_cols=164 Identities=20% Similarity=0.304 Sum_probs=107.6
Q ss_pred EEEECCC-CCCHHHHHHHHHHHHHHHCCCCEE-----------EECCCCCCCHHHHHHHHHHHCCC--------------
Q ss_conf 9962344-333468899999999861489507-----------82054221004779999851034--------------
Q gi|254780711|r 103 IMLVGLQ-GSGKTTTTAKIAYHLKTLKKKKIL-----------MASLDVHRPAAQEQLRYLGEQIQ-------------- 156 (461)
Q Consensus 103 IllvGl~-GsGKTTT~aKLA~~~~~~~~~kV~-----------lv~~Dt~R~aA~eQL~~~a~~~~-------------- 156 (461)
T Consensus 1 iMV~GTsS~AGKs~l~AaLCRiL~r-rGy~VAPFKsQNMSLNSfvt~~~~EiA~AQ~~QA~AAGieP~~~mNPvLLKPkg 79 (502)
T TIGR00313 1 IMVVGTSSSAGKSLLTAALCRILAR-RGYRVAPFKSQNMSLNSFVTAEGGEIAIAQALQALAAGIEPSVHMNPVLLKPKG 79 (502)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 9542011540289999999999852-788127850110101333113787551376899986387886234871016788
Q ss_pred ---------------CCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH-HH--HHHHHHCCCCC
Q ss_conf ---------------742--22332103689999999999741588699833442221124689-99--99985138511
Q gi|254780711|r 157 ---------------VDT--LEVIPEQSPEKIAIRATQSARDGGYDAVILDTAGRNHINDSLMQ-EI--SEIKSLTNPHE 216 (461)
Q Consensus 157 ---------------v~~--~~~~~~~dp~~i~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~-El--~~i~~~~~p~e 216 (461)
T Consensus 80 df~SQviv~G~a~g~~~~~~Y~~~~~d~~~~~i~eSle~L-~~~Yd~vv~EGAG-S~AEINL~~rDLaN~~iA~~~~A~- 156 (502)
T TIGR00313 80 DFTSQVIVHGRAVGDMNAQEYYKNKVDFLLKAIKESLEIL-AEEYDLVVIEGAG-SPAEINLKERDLANMRIAELADAD- 156 (502)
T ss_pred CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECCC-CCCCCCCCCCCCHHHHHHHHCCCC-
T ss_conf 8466789841124667615677799999999999999875-2028889982688-710005331572247898643976-
Q ss_pred CCCCCCHHCCHHHHHHHHHHHHHC------CCCCEEEEECCCCCCC--CHHHHHHHHHCCCHH
Q ss_conf 000310111225688889887635------8440776411576633--036777888478730
Q gi|254780711|r 217 ILLVADALTGQDAVHLARNFDKIV------DLTGIILTRMDGDGRG--GAALSMRTVTGKPIK 271 (461)
Q Consensus 217 ~~lV~da~~Gq~a~~~a~~F~~~~------~i~giIlTKlD~~akg--G~als~~~~~~~PI~ 271 (461)
T Consensus 157 ~iLvADIDRGGVFAsi~GTl~-LL~~~~r~liKG~vINkfRG~~~vL~~GI~~lEelTGiPVL 218 (502)
T TIGR00313 157 VILVADIDRGGVFASIYGTLK-LLPEEERKLIKGIVINKFRGNVDVLESGIEKLEELTGIPVL 218 (502)
T ss_pred EEEEEECCCCCCHHHHHHHHH-HCCCCCCCEECEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 799975077743243374666-18834575003068835468724434456899885484234