HHsearch alignment for GI: 254780711 and conserved domain: TIGR01968
>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. In Escherichia coli, the cell division site is determined by the cooperative activity of min operon products MinC, MinD, and MinE . MinD is a membrane-associated ATPase and is a septum site-determining factor through the activation and regulation of MinC and MinE. MinD is also known to undergo a rapid pole-to-pole oscillation movement in vivo as observed by fluorescent microscopy. In plants, chloroplast division requires the dimerisation of stromal MinD . The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.; GO: 0016887 ATPase activity, 0000918 selection of site for barrier septum formation.
Probab=96.73 E-value=0.0014 Score=47.52 Aligned_cols=135 Identities=27% Similarity=0.409 Sum_probs=73.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC------------------------------
Q ss_conf 34433346889999999986148950782054221004779999851034------------------------------
Q gi|254780711|r 107 GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQ------------------------------ 156 (461)
Q Consensus 107 Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~------------------------------ 156 (461)
T Consensus 9 GKGGVGKTTtTANlG~aLA~l-G~kVvliD~DiG-------LRNLD~~lGLEnRivYt~vDVveG~C~l~qALikDKr~~ 80 (272)
T TIGR01968 9 GKGGVGKTTTTANLGTALARL-GKKVVLIDADIG-------LRNLDLLLGLENRIVYTLVDVVEGECRLQQALIKDKRLE 80 (272)
T ss_pred CCCCCCHHHHHHHHHHHHHHC-CCEEEEEECCCC-------CHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 788977358989999999961-982899954757-------034577742310354535543248421100100126752
Q ss_pred -CCCCCCCCCCHHH----HHHHHHHHHHHHC-CCCEEEEECC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCC--------
Q ss_conf -7422233210368----9999999999741-5886998334-42221124689999998513851100031--------
Q gi|254780711|r 157 -VDTLEVIPEQSPE----KIAIRATQSARDG-GYDAVILDTA-GRNHINDSLMQEISEIKSLTNPHEILLVA-------- 221 (461)
Q Consensus 157 -v~~~~~~~~~dp~----~i~~~a~~~a~~~-~~D~iiiDTa-GR~~~d~~lm~El~~i~~~~~p~e~~lV~-------- 221 (461)
T Consensus 81 NL~LLpAsQ~rdK~~~~~E~~~~lv~~Lk~~~~FDYviIDcPAG---IE-------~GF~nAv~~Ad~AiVVttPEvsav 150 (272)
T TIGR01968 81 NLYLLPASQTRDKDAVTPEQMKKLVNELKEEEHFDYVIIDCPAG---IE-------SGFRNAVAPADEAIVVTTPEVSAV 150 (272)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC---HH-------HHHHHHHHHCCEEEEEECCCCCCH
T ss_conf 35663653023613469778999999985437930799737877---43-------568998752683589877874510
Q ss_pred -CH--HCCHHHHHHHHHHHHHCCC------CCEEEEECCC-CCCCCHHHHHHHH
Q ss_conf -01--1122568888988763584------4077641157-6633036777888
Q gi|254780711|r 222 -DA--LTGQDAVHLARNFDKIVDL------TGIILTRMDG-DGRGGAALSMRTV 265 (461)
Q Consensus 222 -da--~~Gq~a~~~a~~F~~~~~i------~giIlTKlD~-~akgG~als~~~~ 265 (461)
T Consensus 151 RDADRvIG-----lLea~~~-i~~~GEE~~~~LivNR~rP~mV~~G~Mlsi~Dv 198 (272)
T TIGR01968 151 RDADRVIG-----LLEAKGN-IEEKGEEVKIKLIVNRLRPEMVKKGDMLSIDDV 198 (272)
T ss_pred HHHHHHHH-----HHCCCCC-CCCCCCEEEEEEEEECCCHHHHHCCCCCCHHHH
T ss_conf 02556752-----4212455-445776464347785156477416898278999