HHsearch alignment for GI: 254780711 and conserved domain: TIGR03018
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=98.49 E-value=4.2e-06 Score=66.79 Aligned_cols=143 Identities=22% Similarity=0.324 Sum_probs=87.8
Q ss_pred CCCCCEEEEEECC-CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH------------H----HHHHC----
Q ss_conf 2588418996234-4333468899999999861489507820542210047799------------9----98510----
Q gi|254780711|r 96 NAPSPLVIMLVGL-QGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQL------------R----YLGEQ---- 154 (461)
Q Consensus 96 ~~~~p~vIllvGl-~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL------------~----~~a~~---- 154 (461)
T Consensus 31 ~~~~~kvi~VTS~~pgeGKTtva~nLA~~lA~~~~~~VLLVDaDlr~p~l~~~l~~~~~~Gl~d~L~~~~~~l~~~i~~~ 110 (207)
T TIGR03018 31 RKKNNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLRRPSLHRTLGLEAEPGLSDCLLDPVLDLADVLVPT 110 (207)
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHCCCCCCHHHHEECC
T ss_conf 46788099997899999889999999999997249859999535789971001388999985677438998756723426
Q ss_pred --CCCCCCCCC-CCCHHHHHH-----HHHHHHHHHCCCC--EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH-
Q ss_conf --347422233-210368999-----9999999741588--69983344222112468999999851385110003101-
Q gi|254780711|r 155 --IQVDTLEVI-PEQSPEKIA-----IRATQSARDGGYD--AVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADA- 223 (461)
Q Consensus 155 --~~v~~~~~~-~~~dp~~i~-----~~a~~~a~~~~~D--~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da- 223 (461)
T Consensus 111 ~~~~l~vlpag~~~~~~~~ll~s~~~~~li~~l-r~~yd~~~VIiDtPPvl~~~Da-----~~la~~--~D~vllVvr~~ 182 (207)
T TIGR03018 111 NIGRLSLLPAGRRHPNPTELLASQRMRSLLHEL-ARRYPDRIIIIDTPPLLVFSEA-----RALARL--VGQIVLVVEEG 182 (207)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCCEEEEECCCCCCCHHH-----HHHHHH--CCEEEEEEECC
T ss_conf 887555751689899667654269999999999-9737965799838962232369-----999996--89699999799
Q ss_pred HCCHHHHHHH-HHHHHHCCCCCEEE
Q ss_conf 1122568888-98876358440776
Q gi|254780711|r 224 LTGQDAVHLA-RNFDKIVDLTGIIL 247 (461)
Q Consensus 224 ~~Gq~a~~~a-~~F~~~~~i~giIl 247 (461)
T Consensus 183 ~t~~~~v~~a~~~L~-~~~vlG~Vl 206 (207)
T TIGR03018 183 RTTQEAVKEALSALE-SCKVLGVVL 206 (207)
T ss_pred CCCHHHHHHHHHHHC-CCCEEEEEE
T ss_conf 878999999999866-898069996