HHsearch alignment for GI: 254780711 and conserved domain: TIGR03346

>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.
Probab=96.92  E-value=0.016  Score=39.46  Aligned_cols=27  Identities=26%  Similarity=0.352  Sum_probs=21.5

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             8418996234433346889999999986
Q gi|254780711|r   99 SPLVIMLVGLQGSGKTTTTAKIAYHLKT  126 (461)
Q Consensus        99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~  126 (461)
T Consensus       194 KNN-piLVGepGVGKTAIvEGLA~rI~~  220 (852)
T TIGR03346       194 KNN-PVLIGEPGVGKTAIVEGLAQRIVN  220 (852)
T ss_pred             CCC-CCEECCCCCCHHHHHHHHHHHHHC
T ss_conf             489-721279998799999999999866