HHsearch alignment for GI: 254780711 and conserved domain: TIGR03346
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.
Probab=96.92 E-value=0.016 Score=39.46 Aligned_cols=27 Identities=26% Similarity=0.352 Sum_probs=21.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8418996234433346889999999986
Q gi|254780711|r 99 SPLVIMLVGLQGSGKTTTTAKIAYHLKT 126 (461)
Q Consensus 99 ~p~vIllvGl~GsGKTTT~aKLA~~~~~ 126 (461)
T Consensus 194 KNN-piLVGepGVGKTAIvEGLA~rI~~ 220 (852)
T TIGR03346 194 KNN-PVLIGEPGVGKTAIVEGLAQRIVN 220 (852)
T ss_pred CCC-CCEECCCCCCHHHHHHHHHHHHHC
T ss_conf 489-721279998799999999999866