HHsearch alignment for GI: 254780711 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=94.98 E-value=0.018 Score=39.05 Aligned_cols=47 Identities=23% Similarity=0.289 Sum_probs=32.4
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 000258841899623443334688999999998614895078205422
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVH 140 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~ 140 (461)
T Consensus 21 vsf~v~~Gei~gllGpNGAGKTTl~~~l~Gl~~p~~G-~i~i~G~~~~ 67 (301)
T TIGR03522 21 VSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSG-SVQVCGEDVL 67 (301)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECC
T ss_conf 0678859819999999998199999999679568977-7999275134