HHsearch alignment for GI: 254780711 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=97.52 E-value=0.00071 Score=49.79 Aligned_cols=147 Identities=19% Similarity=0.284 Sum_probs=74.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 41899623443334688999999998614895078205422100477999985103474222332103689999999999
Q gi|254780711|r 100 PLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSA 179 (461)
Q Consensus 100 p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a 179 (461)
T Consensus 2 ~~~V~ivG~pN~GKSTL~N~l~g-------~~~~~vs-~~--pgt-------------T-------r~~~~------~~~ 45 (174)
T cd01895 2 PIRIAIIGRPNVGKSSLVNALLG-------EERVIVS-DI--AGT-------------T-------RDSID------VPF 45 (174)
T ss_pred CCEEEEECCCCCCHHHHHHHHHC-------CCCEEEC-CC--CCC-------------E-------EECCE------EEE
T ss_conf 98999998999989999999838-------9844434-99--991-------------5-------73328------999
Q ss_pred HHCCCCEEEEECCCC---CCC--HHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHH--HHHHHHHHHH-CCCCCEEEEECC
Q ss_conf 741588699833442---221--12468999999851385110003101112256--8888988763-584407764115
Q gi|254780711|r 180 RDGGYDAVILDTAGR---NHI--NDSLMQEISEIKSLTNPHEILLVADALTGQDA--VHLARNFDKI-VDLTGIILTRMD 251 (461)
Q Consensus 180 ~~~~~D~iiiDTaGR---~~~--d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a--~~~a~~F~~~-~~i~giIlTKlD 251 (461)
T Consensus 46 ~~~~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p-~iiv~NK~D 124 (174)
T cd01895 46 EYDGKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEGKA-LVIVVNKWD 124 (174)
T ss_pred EECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECEE
T ss_conf 9999889998578842134421068899999999999842865899758989988999999999985998-699985675
Q ss_pred CCCCCCHHHHH-H--------HHHCCCHHHEE--CCCCCCCCC
Q ss_conf 76633036777-8--------88478730261--586723210
Q gi|254780711|r 252 GDGRGGAALSM-R--------TVTGKPIKAIG--TGEKINDLE 283 (461)
Q Consensus 252 ~~akgG~als~-~--------~~~~~PI~fig--~GE~~~dle 283 (461)
T Consensus 125 li~~~~~~~~~~~~~~~~~~~~~~~~~ii~iSA~~g~Gi~~L~ 167 (174)
T cd01895 125 LVEKDSKTMKEFKKEIRRKLPFLDYAPIVFISALTGQGVDKLF 167 (174)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH
T ss_conf 2676477899999999987341689928999744798999999