HHsearch alignment for GI: 254780711 and conserved domain: cd03110
>cd03110 Fer4_NifH_child This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion.
Probab=98.20 E-value=2.3e-05 Score=61.12 Aligned_cols=149 Identities=26% Similarity=0.360 Sum_probs=78.5
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCHH-------------HHH
Q ss_conf 2344333468899999999861489507820542210047799998510-34742223321036-------------899
Q gi|254780711|r 106 VGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQ-IQVDTLEVIPEQSP-------------EKI 171 (461)
Q Consensus 106 vGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~-~~v~~~~~~~~~dp-------------~~i 171 (461)
T Consensus 6 SgKGGVGKTT~a~nLA~~l-----~~V~liD~D~~~~n~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (179)
T cd03110 6 SGKGGTGKTTVTAALAALL-----KNVVLADCDVDAPNLHLFLKPEIEEEEDFIVGGKKAVIDPELCISCGLCGKLVTEV 80 (179)
T ss_pred ECCCCCHHHHHHHHHHHHC-----CCCEEEEECCCCCCHHHHCCCCCCCCEEEEECCCCCEECHHHHHHCCCHHHHHHHH
T ss_conf 5899860999999999974-----28719994189985777718765632122304653351506653235176889999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHH-CC-HH---HHHHHHHHHHHCCCCCEE
Q ss_conf 99999999741588699833442221124689999998513851100031011-12-25---688889887635844077
Q gi|254780711|r 172 AIRATQSARDGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADAL-TG-QD---AVHLARNFDKIVDLTGII 246 (461)
Q Consensus 172 ~~~a~~~a~~~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~-~G-q~---a~~~a~~F~~~~~i~giI 246 (461)
T Consensus 81 ~~~~~~~~~~~~~D~viiD~Ppg~~~--~~~~al~------~ad~~iiVttP~~~si~d~~r~i~l~~~~~--~~~-gvV 149 (179)
T cd03110 81 RKHAKEIAKAEGAELIIIDGPPGIGC--PVIASLT------GADAALLVTEPTPSGLHDLERAVELVRHFG--IPV-GVV 149 (179)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCH--HHHHHHH------CCCEEEEECCCCHHHHHHHHHHHHHHHHCC--CCE-EEE
T ss_conf 99999986443799899818999757--8999997------399499981994789999999999999829--978-999
Q ss_pred EEECCCCCCCCH-HHHHHHHHCCCH
Q ss_conf 641157663303-677788847873
Q gi|254780711|r 247 LTRMDGDGRGGA-ALSMRTVTGKPI 270 (461)
Q Consensus 247 lTKlD~~akgG~-als~~~~~~~PI 270 (461)
T Consensus 150 ~Nr~~~~~~~~~~i~~~~~~~~vp~ 174 (179)
T cd03110 150 INKYDLNDEIAEEIEDYCEEEGIPI 174 (179)
T ss_pred EECCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 9688788763489999999809998