HHsearch alignment for GI: 254780711 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=97.07 E-value=0.0036 Score=44.36 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 02588418996234433346889999999986148950782054221004779999851034742223321036899999
Q gi|254780711|r 95 LNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIR 174 (461)
Q Consensus 95 ~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~ 174 (461)
T Consensus 21 l~i~~Gei~~lvG~nGaGKSTl~~~i~Gl~~p~~G-~i~i~G~~i~~~~~~~-----~~~~gi~~v~qLSgG~~Qrv--- 91 (163)
T cd03216 21 LSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSG-EILVDGKEVSFASPRD-----ARRAGIAMVYQLSVGERQMV--- 91 (163)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECCCCCHHH-----HHHCCCCEECCCCHHHHHHH---
T ss_conf 89879989999988998999999999577689857-8999999999999999-----99879948946998999999---
Q ss_pred HHHHHHHCCCCEEEEE--CCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 9999974158869983--3442221124689999998513
Q gi|254780711|r 175 ATQSARDGGYDAVILD--TAGRNHINDSLMQEISEIKSLT 212 (461)
Q Consensus 175 a~~~a~~~~~D~iiiD--TaGR~~~d~~lm~El~~i~~~~ 212 (461)
T Consensus 92 ~iaral~~~p~llilDEPt~g---LD~~~~~~i~~~l~~l 128 (163)
T cd03216 92 EIARALARNARLLILDEPTAA---LTPAEVERLFKVIRRL 128 (163)
T ss_pred HHHHHHHHCCCEEEEECCCCC---CCHHHHHHHHHHHHHH
T ss_conf 999999729999999097557---9999999999999999